Gene Avin_21400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21400 
Symbol 
ID7761063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2139958 
End bp2140911 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID643805031 
ProductTranscriptional regulator, LysR family 
Protein accessionYP_002799312 
Protein GI226944239 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTT ATGTGAAGGC CATGATGAAT GCCGAACGGA AAGCGCCCAT GCCCTCCCCG 
ACCCTGGACC TGGAACTGCT GAGAACCTTC ATCGCCGTGG CGGACAGCCA GAGCTTCGCC
GAAGCCGGGC AGCGGCTGGC GCGGACGCAA TCGTCCGTCA CCCAGCAGAT GCAGCGTCTC
GAACAATCGG TCGGCGTCGC CCTGTTCCAG AAACAGGGCC GCCAGAAACA GCTCACCGAC
GCAGGCCGGC AACTGCTGCG CCGCGCCAGG GAAATGCTCG CGCTCAACGA CGACGCGCTG
AACTCCCTGC GCGAAGAGGG CCTCAGCGGC GTGCTGCGCA TCGGCTCGCC GCACGATGTC
GCCGACACCA TACTGCCGCC GATCCTCAGC CACATCGCCC GCGCCGCACC GCGCCTGCGC
CTGGAGATCG ACGTGGGCCG CAGCCCCTTC CTGATGGAAG ACCTGCACCG CGGCCGGGTC
GACATGATCA TTTCCACCCG CGAGGACCCG AACCTGGAAG GCTTCCCCCT GCGCACCTCG
CCGGTCTGGT GGATCTGCTC CGCGCAGTAC CTGCACATGC CCCACGCGCC CCTGCCGCTG
ATCCTCATCG ACGAGTCGAG CATCTACCAC CGCTACGCCC TCGAAGCGCT CGAACAGCAC
CGCATACCCT GGCGCCAGGC CTACCAGGCC TCGAACCTGA TCGGCGTCAA GGCCGCCATC
CGCGCCGGCC TGGGCATCAC CGCGCGCAGC ATGGAACTGC TCGGCCCGGA CATGCGCGTG
CTGGGCGAGA AGGAAGGCCT GCCGCGCCTG CCGGACGTCA CCTACCACCT GTGGATTCGC
CCGAACACCC ACAACCCCAT GGTGCGCAAG GCCTACGACC TCATCCGCAG CCATCACGAG
GCTGCCTATC GGAACGGGCG GCGGGAACGG GTGGGGGCGG ACAAGGGAGC GTGA
 
Protein sequence
MMFYVKAMMN AERKAPMPSP TLDLELLRTF IAVADSQSFA EAGQRLARTQ SSVTQQMQRL 
EQSVGVALFQ KQGRQKQLTD AGRQLLRRAR EMLALNDDAL NSLREEGLSG VLRIGSPHDV
ADTILPPILS HIARAAPRLR LEIDVGRSPF LMEDLHRGRV DMIISTREDP NLEGFPLRTS
PVWWICSAQY LHMPHAPLPL ILIDESSIYH RYALEALEQH RIPWRQAYQA SNLIGVKAAI
RAGLGITARS MELLGPDMRV LGEKEGLPRL PDVTYHLWIR PNTHNPMVRK AYDLIRSHHE
AAYRNGRRER VGADKGA