Gene Avin_21300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21300 
Symbol 
ID7761055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2129963 
End bp2131021 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content71% 
IMG OID643805025 
ProductABC transporter, ATP binding component 
Protein accessionYP_002799306 
Protein GI226944233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTGC CGCGCCTGGA ACTTCGCCAT CTGGTCAAGA CGCTGGGCGC CAGCCGGATC 
GTCGACGGGC TCGATCTGGC CATCGCGCCC GGTGAAGTCG TGGTGCTGCT GGGCCCCAGC
GGCTGCGGCA AGACCACCAC GCTGCGGATG GTGGCCGGCT TTCTCCAGCC CGACGAAGGA
GAGGTGCACC TGGCCGGTCG CCTGGCGGCC AGTGCGCGCT TCGCCCTGCC GCCGGAGAAG
CGCCACCTGG GGATGATGTT CCAGAACTAC GCGGTCTGGC CGCACAAGAC GGTGTTCCAG
AACGTCGCCT ATGGCCTGCA GGTGGCCGGT ATCGCCCGCG ACGAGATCCG CCGGCGGGTG
GAGCGCATGC TGGCGATCGT CGATCTGGAC GGCCATGCCG GGCGCAAGCC CGCCGACCTG
AGCGGCGGCC AGCAGCAGCG GGTGGCCTTG GCCCGCGCGC TGGTCACCGA GCCCTCGCTG
CTGCTGCTCG ACGAGCCCCT GTCCAACCTC GACGCGGCGC TGCGCCAGTC GATGCGTGTC
GAGCTGAAGG CGCTGCAGCG CCGGGTCGGG GTGAGCATGC TGTATGTCAC CCACGATCAG
GACGAAGCGC TGGTGCTGGC CGACCGCATC GTGGTCATGC GCGGCGGCCG CATCGAACAG
ATCGGCACGC CGGAGGACAT CTACCGGCGG CCGCGCACGC GCTTCGTGGC CGAATTCATC
GGCCGCGCCA ACCTGCTGCC CGGCACGCTG GAGGCGCTGG ACGGGCAGGG TAGGGCACGG
GTCCGCCTGG ACGCCGGGCC GGTGTTCCGC GCCCTGGGCG GGCCGGGTCT CGCCGCGGGC
CAGCGCTGCC AGGTGGTGGT GCGCCCGGAA CAGATCCTGT TCGCTCCCGG CGGAGCGGAG
GCCCGGCTTT GCCAGACGCT ATTCCTGGGC AGCCACTACG AACTGACCCT GGAGCTGGGG
GAGAGCCGCC TGCAGGCGGA GGCCCGCCAC CTGCCCGCGA TGCAGGACGG TCGCCTGTCG
GTGGCCATCG AAGACGACAG CGCCTGGGTG TTGCCATGA
 
Protein sequence
MAVPRLELRH LVKTLGASRI VDGLDLAIAP GEVVVLLGPS GCGKTTTLRM VAGFLQPDEG 
EVHLAGRLAA SARFALPPEK RHLGMMFQNY AVWPHKTVFQ NVAYGLQVAG IARDEIRRRV
ERMLAIVDLD GHAGRKPADL SGGQQQRVAL ARALVTEPSL LLLDEPLSNL DAALRQSMRV
ELKALQRRVG VSMLYVTHDQ DEALVLADRI VVMRGGRIEQ IGTPEDIYRR PRTRFVAEFI
GRANLLPGTL EALDGQGRAR VRLDAGPVFR ALGGPGLAAG QRCQVVVRPE QILFAPGGAE
ARLCQTLFLG SHYELTLELG ESRLQAEARH LPAMQDGRLS VAIEDDSAWV LP