Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_21230 |
Symbol | csbX |
ID | 7761048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2120116 |
End bp | 2121339 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643805018 |
Product | catecholate siderophore efflux pump, MFS_1 family |
Protein accession | YP_002799299 |
Protein GI | 226944226 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000768503 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGG ACCAATCCCT GCAATCGGAA GCACGAACGA AACCTTTTGC AGCAATTTCA CCCAAGGTGC TCATCGCCCT GATCGCCTCC CTGCAGTTCA CCTACATTCT CGATTTCATG CTGGTCCTGC CGCTCGGCCC GGATTTGGCC AAAGGTCTCA ACTTTCACGG TAATCAAGTT GCATGGCTAA CAGCCAGCTA TACATTTGCG TCCTTGCTGT CCGGTCTGTT CACCGTGCCG CGCCTGGATC GCTTCGATCG CCGCAAGGCC CTGCTCTGGA GCCTGGTGGG ACTGGCGCTC GCTTCGCTGG CCTGTACCCT GGCGCATGAT TTGCCGAGCC TGCTGCTCGG ACGGGCCGTC GCCGGGCTCT GTGCCGCCCC GGCGATCGCC ACCGGCATGG CGATCCTGAT CGACCAGACG CCGCCGCCAC AGCGCGGGAC AGCCATCGCC AAGGTCATGA CCGGGTTTTC CATCGCCACC ATCGCCGGGA TTCCCCTGGC GCTGGAACTG GCGGACCACT TCGGCTGGCA GGCGCCCTTC GTGCTGGTGG CTGTGCTGGT GGTGCTGGTC GCCTTCGCCG TGGCCCATCT GTTGCCGCCG CTGACCGCCC ACCTGCAAGG GCCGGCTGGC AAGCCGTCGC TGGCCATGCT GAGCCGTCCC GGCGTGCGCC TGGCCACGCT GTTGCAGGGG CTCAACCAGT TCTCCGCCTT CCTGGTGATC CCGAGCTTCT CCGCGTTCTA CCTGCTGAAC CTCGATTACC CGCGTCAGCA ACTGGGTACG CTGTACCTGG TGGGCGGTCT GGTGGCGCTG GGGGCCATGC AACTGGCCGG ACGCCTGGGC GATCGACACG GCCACTGGCT GCCGGTCGGC GTGGCCAGCG CCTGTTTCGC CGTCGGCCTG CTGCCGTTCT TCGGCCTGAG CGCCTTGCCG CTGATGCTGA GCTTCGTGCT GTTCATGGCC GGCAACGCCG CCCGCACGGT CTGCCTGGCG GCCGCCATCA GCCATGTTCC GGCGCCGCCG GAGCGCGCCG GTTTCATGGC CCTGCAGAAG ATGACCCAGG ATTTCAGCGT GGCCCTGGCC GCCGGCGCCG CGGCGCTGGT GCTGGGTGGC GGCGACGGGC CGCTGACCCA TACCGGACTG CTCGCCACCC TGGCGATCGT CGGTGCGGGG CTGGTCCTCT GGGTGCTCGA ACGGCTGCGG CGAAACCTGC AGCCGCCGGC CTGA
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Protein sequence | MNPDQSLQSE ARTKPFAAIS PKVLIALIAS LQFTYILDFM LVLPLGPDLA KGLNFHGNQV AWLTASYTFA SLLSGLFTVP RLDRFDRRKA LLWSLVGLAL ASLACTLAHD LPSLLLGRAV AGLCAAPAIA TGMAILIDQT PPPQRGTAIA KVMTGFSIAT IAGIPLALEL ADHFGWQAPF VLVAVLVVLV AFAVAHLLPP LTAHLQGPAG KPSLAMLSRP GVRLATLLQG LNQFSAFLVI PSFSAFYLLN LDYPRQQLGT LYLVGGLVAL GAMQLAGRLG DRHGHWLPVG VASACFAVGL LPFFGLSALP LMLSFVLFMA GNAARTVCLA AAISHVPAPP ERAGFMALQK MTQDFSVALA AGAAALVLGG GDGPLTHTGL LATLAIVGAG LVLWVLERLR RNLQPPA
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