Gene Avin_21200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21200 
SymbolentB 
ID7761045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2116121 
End bp2116957 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID643805015 
ProductIsochorismatase (2,3 dihydro-2,3 dihydroxybenzoate synthase) 
Protein accessionYP_002799296 
Protein GI226944223 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase
[COG3433] Aryl carrier domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0178393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG CAGAAACCTT TCCCTCCGGC CGTGTCGACT GGCAGGCCGA CCCGAAACGG 
GTGGCGTTGC TGGTGCACGA CATGCAGGAA TACTTCATCG ATTTCTACGA CCGTAGTGCC
GCGCCGATCC CGCAACTGGT AGCCAACATC CGCCGCCTGA TCGACGCCTG CGACGCCGCC
GGCGTGCCGG TCTACTACAC CGCCCAGCCG GCCGTGCAGC CGGCCGGGGA CCGGGCGCTG
CTCAACGAGT TCTGGGGCCC CGGCCTGCCG GCCAAACCGG AGGGGGCGCC GGTCATCGCC
GCGCTGGCGC CCAGGGAAAA CCACGTGGTG CTGGACAAGT GGCGCTACAG CGCCTTCATC
CGCAGCGACC TGCGCGAGCG CCTGCAGGCG GCCGGCCGCG ATCAACTGAT GGTCTGCGGC
ATCTACGCCC ACATCGGCTG CCAGACCACC TGCGTGGACG CCTTCATGCG CGACGTCCAG
CCGATCATGG TCGGGGACGC GCTGGCCGAC TTCTCGCCGG AGCGGCACCG CCAGGCGCTG
GACTACGTGG TCGCCTGCGC CGGCGTGGTG CGCGACACCG ACCAGTTGAT CGCCGCGCTG
GCCGGCGGGC TGCCGGCCAG CATCGAGGCC CTGCACCAGG AAGTCGCGCA GATGCTCGGC
ATGCCGGCCT CGGACTTCAG CGTCGAGGAC AACCTGCTGG ATGTCGGGCT GGACTCGATC
CGCCTGATGA GCCTGCTCGA AGGCTGGAAG CGCGCCGGCG CCCAGGTGAG CTTCGTCCAG
GTGGCCGAGC AGCCGACGCT GGCCCACTGG TGGTCGCTGC TGAGCGAGGG ACGTTGA
 
Protein sequence
MPAAETFPSG RVDWQADPKR VALLVHDMQE YFIDFYDRSA APIPQLVANI RRLIDACDAA 
GVPVYYTAQP AVQPAGDRAL LNEFWGPGLP AKPEGAPVIA ALAPRENHVV LDKWRYSAFI
RSDLRERLQA AGRDQLMVCG IYAHIGCQTT CVDAFMRDVQ PIMVGDALAD FSPERHRQAL
DYVVACAGVV RDTDQLIAAL AGGLPASIEA LHQEVAQMLG MPASDFSVED NLLDVGLDSI
RLMSLLEGWK RAGAQVSFVQ VAEQPTLAHW WSLLSEGR