Gene Avin_21140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21140 
Symbol 
ID7761039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2108379 
End bp2108729 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content71% 
IMG OID643805009 
Producthydroxyisourate hydrolase, transthyretin family protein 
Protein accessionYP_002799290 
Protein GI226944217 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAC TGACCACCCA TGTGCTCGAC ACCAGCCACG GCTGCCCCGG CGCGGGCATC 
GCCATCGACC TCTACCGCCT CGACGGCGAG CGGCGGCAGT CGCTGGGCCA GGCCGTGACC
AACGCCGACG GACGCTGCGA CGCGCCGCTC CTGGAGGGCG AGGCGTTTCG CGCCGGCGTC
TACGAACTGC ACTTCCACGC CGGCGACTAC TACCGCCGCC GCGGGGTGCG CCTGGCCGAG
CCGGCCTTTC TCGATGTGGT GGTGCTGCGC GTCGGACTGG GCGGCGAGGG GCATTACCAC
GTGCCGCTGT TGGTGTCGCC GTACGGCTAT TCCACCTATC GCGGCAGCTA G
 
Protein sequence
MARLTTHVLD TSHGCPGAGI AIDLYRLDGE RRQSLGQAVT NADGRCDAPL LEGEAFRAGV 
YELHFHAGDY YRRRGVRLAE PAFLDVVVLR VGLGGEGHYH VPLLVSPYGY STYRGS