Gene Avin_20790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20790 
Symbol 
ID7761004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2071666 
End bp2072562 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content68% 
IMG OID643804974 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002799255 
Protein GI226944182 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.596943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATT CCTTGAGGCG TCTCGACCTG AACCTGCTGG TCACGCTCAA CGCCTTGCTG 
GCCGAGCACA ACGTGACCCG TGCGGCCATG CGCCTGCATC TGTCGCAGCC CACGGTAAGC
GTGCAGCTCG CCAGGCTGCG GGAAGTCTTC GGCGATCCGT TGCTGCTGCC CGGCCCTCGG
GGCATGCGGC CCACCGCGCG CGCGGACGAA CTGCGCGAGC CGCTACGCCA GGCGCTGGAA
GCACTGGAAC GGGCGGTGGC CCCTTCCAGT CCCTTCGACC CCGCCCGGGC CGGCCAGACC
TGGCGCATCG CGGCCTCGGA CTACGGCGAG TCCACCATCC TGTCGCCGGC GCTGGCCGGG
CTGCGGTCGG CGGCGCCCGG CACGCGGTTG GCGATTCTGG AACTGCTCCC GCCGATGCTG
GCCCGCCAGG CGGAACAGGC TGATATCGAC CTGGCCTTCC ACATCAGCGC GGAAGCCCCG
CCGTCCCTGC AGCGCAGGCC GTTGTTCACC GAACGCTACG TGCTGGCCGG CCGCGTCGGA
CATCCTCGAT TGAAACGCCG CCCGACGCTG GCACAGTTCT GCAAGCTCGA TCATGTGATC
GTATCGCCGG ACGGCGGCGG CTTTCATGGC GTGACGGATA CGGCGCTGGC CGAGCTGGGC
ATGACGCGAC GGGTCGCGCT GTCCGTTCCG CACTTCCTGT TTCTCGCATC GGTGCTGACC
AGCACCGATC TGGTGGCGAT GGTGCCGTCC CGGCTGGTAC GCGACAACGA TGCGTTGCAA
GTGGTCGAGC CGCCCTTGGA AGTGCCGGGC TTCGAGATGC TCATGCTCTG GCACGAGCGC
GTTCATCGCG ATCCTGCACA CCAGTGGCTG CGCGAGCACA TCGTGAAATC GCTATGA
 
Protein sequence
MNNSLRRLDL NLLVTLNALL AEHNVTRAAM RLHLSQPTVS VQLARLREVF GDPLLLPGPR 
GMRPTARADE LREPLRQALE ALERAVAPSS PFDPARAGQT WRIAASDYGE STILSPALAG
LRSAAPGTRL AILELLPPML ARQAEQADID LAFHISAEAP PSLQRRPLFT ERYVLAGRVG
HPRLKRRPTL AQFCKLDHVI VSPDGGGFHG VTDTALAELG MTRRVALSVP HFLFLASVLT
STDLVAMVPS RLVRDNDALQ VVEPPLEVPG FEMLMLWHER VHRDPAHQWL REHIVKSL