| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_20660 |
|---|
| Symbol | |
|---|
| ID | 7760992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2056464 |
|---|
| End bp | 2057876 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643804963 |
|---|
| Product | MoaA, NifB, PqqE, radical SAM superfamily protein |
|---|
| Protein accession | YP_002799244 |
|---|
| Protein GI | 226944171 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGCAGGCTC CATCCTTTGA TGGTTTCGAT GGCGGTGCCG GTTCGCGTTA TCAGGCTAAG
CGCGAAATCA AGAGTTTCTG GTATCCGACC TGGTTGGCTC AGCCGGCCGC CCTGGTGCCC
GGTTCACGCC TGCTGGACGC TCCGGTGGAG GAGCTTTCGG TGGAGGAGTC GCTGAGGATT
GCCGCCGAAT ACGAGTTGGT GATCATCCAT ACCAGCACGC CTTCTTTCCC AACCGATGCC
AAGTTCGCCG AATTGCTGAA GGCGCGCCGC CCCGAGGTTC TGATCGGTAT GGTCGGCGCC
AAGGTCGCGG TCGATCCGAC CGACTCGCTG AACGCATCGA CGGCGATCGA CTTCGTGGCG
CGCGAGGAAT TCGATTACAC CTGCAAGGAA ATCGCCGAGG GCCATCCGCT CGAGGAGGTC
GCCGGCGTTA GCTATAAACT CGCCGATGGC GACGTGCGGC ACAACCCGCC GCGGGCGCCG
ATCGAGAATA TGGACGACCT GCCCTTCGTG GCGCCCGTCT ACAAGCGCGA CCTGAAGATC
GACCGCTATT TTATCGGCTA TCTCAAGCAT CCTTACGTAT CCATTTATAC CGGTCGTGGC
TGCCGCTCCA AGTGCACCTT CTGCCTATGG CCGCAGACCG TCGGCGGTCA CCGTTACCGT
GTCCGCTCGG CCGCCAGCGT GATCGCCGAG GCGAAGTGGA TCAAGGAGAA CATGCCCGAA
GTGAAGGAGT TGATGTTCGA CGACGATACC TTCACCGATA CTTCCAACTT GGAGCGTGTA
CACGAGATCG CCCGCGGCCT GCATGCTCTG GGCTGGACCT GGAGTTGCAA CGCCAAGGCC
AACGTACCCT ACGAATCGCT GAAGATCATG AAGGAAAATG GCCTGCGCCT GCTGCTGGTG
GGCTACGAGT CCGGCGACGA CCAGATCCTG CACAACATCA AGAAGGGCCT GCGTACCGAT
ATCGCCCGCA AGTTCACTGA AAATTGCCAC AAGCTGGGCA TTCAGGTGCA CGGTACCTTC
ATCCTCGGCC TGCCGGGGGA GACCAAGGAA ACCATCGCCA AGACCATCGA GTTTGCCAAG
GAGATAAATC CGCACACGGT GCAGGTATCG CTGGCGGCTC CCTATCCCGG TACCACGTTG
TACAGGCAGG CTGTGGAAAG TGGCTGGCTA GAGCCCAATC AGGACGCCAA CTTGGTCAAT
GACAAGGGAG TGCAACTGGC ACTGATCAGC TATCCACACC TGTCCAAGGA AGAGATCTAT
CACGGTGTGG AGACTTTCTA CCGGAACTTC TATTTTCGTC CCTCGAAAAT CTGGGAGATC
GTCAAGGAAA TGCTCGGCAG TTGGGAAATG ACGAAGCGCC GCCTACGCGA GGGCGTGGAG
TTTTTCCGCT TCCTGCATGC TCATGAGGCC TGA
|
|---|
| Protein sequence | MQAPSFDGFD GGAGSRYQAK REIKSFWYPT WLAQPAALVP GSRLLDAPVE ELSVEESLRI
AAEYELVIIH TSTPSFPTDA KFAELLKARR PEVLIGMVGA KVAVDPTDSL NASTAIDFVA
REEFDYTCKE IAEGHPLEEV AGVSYKLADG DVRHNPPRAP IENMDDLPFV APVYKRDLKI
DRYFIGYLKH PYVSIYTGRG CRSKCTFCLW PQTVGGHRYR VRSAASVIAE AKWIKENMPE
VKELMFDDDT FTDTSNLERV HEIARGLHAL GWTWSCNAKA NVPYESLKIM KENGLRLLLV
GYESGDDQIL HNIKKGLRTD IARKFTENCH KLGIQVHGTF ILGLPGETKE TIAKTIEFAK
EINPHTVQVS LAAPYPGTTL YRQAVESGWL EPNQDANLVN DKGVQLALIS YPHLSKEEIY
HGVETFYRNF YFRPSKIWEI VKEMLGSWEM TKRRLREGVE FFRFLHAHEA
|
|---|
| |