Gene Avin_20570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20570 
Symbol 
ID7760983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp2048085 
End bp2048711 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content51% 
IMG OID643804954 
ProductVacJ-like lipoprotein 
Protein accessionYP_002799235 
Protein GI226944162 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGA TTGCCGAAGA TCAGGACCCG TGGGAGACGT TCAACCGGGC GATATTTCGT 
TTCAACGATA CCTTGGATAC TTATTTCATG AAGCCGGTTG CCAAAGGGTA CCAGGCTATT 
GCTCCGCAGT TCGTTGAAGA TGGGGTGCAT AATGCCTATC GCAACATTGG CGAGGTCGGT 
AACTTGGCCA ACGATCTGCT GCAGGTAAAA TTCCACGATG CAGGTGTCGA TAGCAGCAGG 
TTGTTGCTCA ATACCACCAT TGGCGTATTG GGATTTGTCG ATGTGGCGAC CAGGATGGGG 
CTTAATCGCA ACGACGAGGA TTTTGGTCAA ACCCTCGGTG CCTGGGGCGT ATCTAGCGGG 
CCCTATGTGG TCTTGCCTTT CTTTGGGCCG AGCACCGTGC GTGATACGGG TGGGTTAATT 
GGGGATGCTT TTACGAAGCC CTATATTTAC ATGAATAATA CGACTGCTAA AAATGCCTTG 
TTTGCTGGCG AGGTTGTAGA TACCCGAGCA TCTCTGTTGT CGGCCGAGAA ACTCATTACC 
GGCGATAGAT ACATATTCAT CCGCAATGCC TATATGCAAA GCCGCGAGTT CAAGGCGCAG 
GATGGCAAGG TGGAGGATGA TTTCTGA
 
Protein sequence
MTAIAEDQDP WETFNRAIFR FNDTLDTYFM KPVAKGYQAI APQFVEDGVH NAYRNIGEVG 
NLANDLLQVK FHDAGVDSSR LLLNTTIGVL GFVDVATRMG LNRNDEDFGQ TLGAWGVSSG 
PYVVLPFFGP STVRDTGGLI GDAFTKPYIY MNNTTAKNAL FAGEVVDTRA SLLSAEKLIT 
GDRYIFIRNA YMQSREFKAQ DGKVEDDF