Gene Avin_20300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20300 
Symbol 
ID7760957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2020500 
End bp2021807 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content64% 
IMG OID643804926 
Productmajor facilitator superfamily (MFS) permease 
Protein accessionYP_002799209 
Protein GI226944136 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00897] polyol permease family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.900151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCATC GCGAAGAATC GCGGGGGCTG CTGTTCGGCA TGCCCTTGTC CCTGATCTGG 
GGCTATATCG CCATCGCCCT GTTCATGACG GGCGACGGCA TCGAACTGGC CTTTCTGTCA
CGCTATGTCG TCGATCTGGG TTTCTCGGCT ACCCAGGCAT CCCTCCTCTT CACCGTCTAC
GGATTGCTGG CGGCCCTGTC CGGTTGGAGT TCGGGAGTAT TGGCCGACGT ATTCGGGCCG
AGGCGGATCA TGCGTATCGG CGTGGCCGCC TGGATTCTCT TCCATGCACT CTTCCTGGTC
TTCGGCCTGG AGGAAAAGAA CTTCTCCTTG ATGGTGCTGT TCTACGGCAT TCGCGGCCTG
GCCTATCCCC TGTTCATTTA CGCCTTCGTC GTCTGGGTCG CCCAGGTGAC GCCACGCGCC
CGCCTGGCTT CGGCCATGGG CTGGTACTGG ACGATGTATT CGATCGGCAT CGGCTTTCTC
GGCACTTATC TGCCGAGTTT CAGCATTCCG CATATCGGCT TCATGGGCAC CCTGTGGATG
GCCATCGCCT GGGTGGCGAC AGCGGGCGCC ATGGTCGTGT TCCTGGTCAA GGACCGGCAG
GCGGAAGACA GCGGCGCCAG CCGCAATCCG GCCGAGCGCT TTCATGAACT GGGCCGCGGC
GTCACCATCC TTTTCCGGCA CCGCGGCATC CTCGTCGCCG CCATCGTGCG GATCATCTGC
AACCTGACGC TGTTCGGCTT CCCGGTGATC ATGCCGCTGT TCTTCACCTC GCCCGAGGTG
GGCTTCAGCA TGGAGCAATG GCTGCGCATC TGGGGCGCCC TGTTCATCGT CACCATCTTC
ACCAACGTGA TGTGGGGCCT GATCGGCGAC CGGATCGGCT GGGTGTTCCA GATGCGCTGG
TTCGGCTGCG CCGGATGCGC GCTCGCCACC CTGGCCTTCT ACTACGTGCC GCTCGCCTAC
GGCGCCAGCT TCCCGGCCGC CGTCCTGGCC GCGGCCGCCC TGGGCGTCGG CGTATCCGCC
TTCGTACCGA TGGGCGCCAT CTTTCCGGCC ATGGCGCCGG AACACAAGGG CGCGGCCATT
TCGGCCCACA ACCTGGCCGC CGGCCTTTCC AACTTCATGG GGCCGGCCAT CGCCACCCTG
AGCATTTCCG CCGTGGGCGT GGAAGGCGTG GTGTGGATCT ACGCCTCGCT CTACCTCGTC
GGGGTGGTGC TGACCTATTT CATCCATGTC GAACAGCCCG GACTCGAGCA CAAGGCCAGG
TCCGGCCCAC GTATCCCGCA CTCATCGAAC GCCAGCAAAG CCATCTGA
 
Protein sequence
MTHREESRGL LFGMPLSLIW GYIAIALFMT GDGIELAFLS RYVVDLGFSA TQASLLFTVY 
GLLAALSGWS SGVLADVFGP RRIMRIGVAA WILFHALFLV FGLEEKNFSL MVLFYGIRGL
AYPLFIYAFV VWVAQVTPRA RLASAMGWYW TMYSIGIGFL GTYLPSFSIP HIGFMGTLWM
AIAWVATAGA MVVFLVKDRQ AEDSGASRNP AERFHELGRG VTILFRHRGI LVAAIVRIIC
NLTLFGFPVI MPLFFTSPEV GFSMEQWLRI WGALFIVTIF TNVMWGLIGD RIGWVFQMRW
FGCAGCALAT LAFYYVPLAY GASFPAAVLA AAALGVGVSA FVPMGAIFPA MAPEHKGAAI
SAHNLAAGLS NFMGPAIATL SISAVGVEGV VWIYASLYLV GVVLTYFIHV EQPGLEHKAR
SGPRIPHSSN ASKAI