| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_20290 |
|---|
| Symbol | |
|---|
| ID | 7760956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2019440 |
|---|
| End bp | 2020483 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643804925 |
|---|
| Product | xylitol dehydrogeanse |
|---|
| Protein accession | YP_002799208 |
|---|
| Protein GI | 226944135 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.92253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTC TGGTCCTGGA AAAGCAGCAC GACCTGAAGA TCCGCGACAT CGACCTGCCC
ACGCCGCCAG TGGGGCCGGA CGACGTGCGC ATCCGCATCC ATACCGTCGG CGTGTGCGGC
AGCGACGTGC ACTACTACAC CCACGGGCGC ATCGGTCATT TCATCGTCGA CCGGCCGCTG
GTGCTGGGAC ACGAGGCGGC CGGCACGGTC GTCGAGGTCG GCAGCGGCGT CACCCGCCTG
GCCGTGGGCG ACCGCGTCTG CATGGAGCCC GGCATTCCCG ATCCCAAGTC GAAGGCCTCG
CGCCTGGGCC TCTACAACGT CGATCCTTCG GTCGTGTTCT GGGCCACCCC GCCGGTGCAC
GGCTGCCTGA CCCCGGAAGT CGTCCATCCG GCGGCTTTCG TCTATAAACT CCCCGACAAC
GTCGGCTTCG CCGAGGGGGC GCTGGTGGAG CCCTTCGCGA TCGGCATGCA GGCGGCCGTC
AAGGCCCGCA TCAAGCCCGG CGACGTCGCC GTGGTCATCG GCGCCGGCAC CATCGGCATG
ATGACCGCCC TGGCCGCGCT GGCCGGCGGC GCGAGCCGGG TGCTGGTGTC CGACCTGATG
GTGGAGAAGC TGGCCATCGC CCAGCGCTAT GAAGGCATCA CCGCCGTCAA CGTGCGCGAG
CGCTCCCTGC GCGACGCGGT GGCCGAGGTC ACCGACGGCT GGGGCGCGGA TGTGGTGTTC
GAGGCCAGCG GTAGCGCCCG GGCCTATGGC GATGCACTGG CGGCGGTCTG CCCGGGCGGG
GCGCTGGTAT TGGTGGGCAT GCCGGTCGAG CCGGTGCCCT TCGACGTGGT GGCGGCCCAG
GCCAAGGAGA TCCGCATCGA GACCGTGTTC CGCTACGCCA ATGTCTACGA GCGGGCGGTG
AACCTGATCG CCAGCGGCAA GGTCGATCTG AAGCCGCTGG TCTCGGCGAC CTACCCCTTC
GAACGGGGTG TCGAGGCCTT CGAGCGGGCC GCCAGCGCCC GGCCGGGCGA TGTGAAGGTG
CAGATCACCT TCGGCGACGG CTGA
|
|---|
| Protein sequence | MKALVLEKQH DLKIRDIDLP TPPVGPDDVR IRIHTVGVCG SDVHYYTHGR IGHFIVDRPL
VLGHEAAGTV VEVGSGVTRL AVGDRVCMEP GIPDPKSKAS RLGLYNVDPS VVFWATPPVH
GCLTPEVVHP AAFVYKLPDN VGFAEGALVE PFAIGMQAAV KARIKPGDVA VVIGAGTIGM
MTALAALAGG ASRVLVSDLM VEKLAIAQRY EGITAVNVRE RSLRDAVAEV TDGWGADVVF
EASGSARAYG DALAAVCPGG ALVLVGMPVE PVPFDVVAAQ AKEIRIETVF RYANVYERAV
NLIASGKVDL KPLVSATYPF ERGVEAFERA ASARPGDVKV QITFGDG
|
|---|
| |