Gene Avin_20020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_20020 
Symbol 
ID7760932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp1989287 
End bp1989928 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID643804900 
Producthypothetical protein 
Protein accessionYP_002799184 
Protein GI226944111 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGGT GGCTGTGGAG TGGTCCGCCG CCCGCCGAGT CGCATGCCTG CCTGATTCTG 
GCCCATGGCG CCGGCGCTCC GATGGATAGC GGATTCATGG CGGGCATGGC CGAGCGTCTC 
GCCGTTCGCG GGATTTCCGT AGTGCGTTTC GAGTTTCCCT ACATGGCGGA GCGGCGGTCG 
GGCGGTGGCA GGCGTCCTCC CGATCCGCAG GCGCGCTTGT TGGATTGTTG GCGTGAAGTG 
TACTCGCGGT TGCGCCGGGA GGTATCCGGG CCCTTGGCGA TCGGCGGCAA GTCGATGGGC 
GGGCGTATGG CAAGCCTGCT GGCGGATGAG TTGGAAGCCC GGGCTCTCGT CTGTCTGGGT 
TACCCTTTTC ACCCTGCAGG CAGGCCGGAC AGGCCGAGAA CGGCTCATCT GGCCGAACTC 
GGGACGCCGA CCCTGATCGT TCAGGGAGAG CGTGACGCCC TGGGCAAACG GGACAGAGTG 
AGAGAATATT CCCTGTCGCC CACGATACGC CTCCATTGGC TGGAAGCCGC CGACCATGAC 
CTGAAGCCAC TCAAGGCTTC AGGCTTCACC CACGAGCGTC ACCTCGATTC CGCTTCGGAT 
ATCGTTGCAG GCTTTCTGCA ATCCGTCGGT CGGTTCGTCT GA
 
Protein sequence
MGRWLWSGPP PAESHACLIL AHGAGAPMDS GFMAGMAERL AVRGISVVRF EFPYMAERRS 
GGGRRPPDPQ ARLLDCWREV YSRLRREVSG PLAIGGKSMG GRMASLLADE LEARALVCLG 
YPFHPAGRPD RPRTAHLAEL GTPTLIVQGE RDALGKRDRV REYSLSPTIR LHWLEAADHD 
LKPLKASGFT HERHLDSASD IVAGFLQSVG RFV