Gene Avin_20000 details

Gene Information

• Locus tag: Avin_20000
• Symbol: ccoO
• ID: 7760930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 1986815
• End bp: 1987423
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643804898
• Product: cytochrome c oxidase, cbb3-type, subunit II
• Protein accession: YP_002799182
• Protein GI: 226944109
• COG category: [C] Energy production and conversion
• COG ID: [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit
• TIGRFAM ID: [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCACG AAACACTCGA AAAGAACATT GGCCTGCTGG GTCTGTTCAT GGTCGCCGCC 
GTCAGCATCG GTGGGCTGAC CCAGATCGTT CCGCTGTTTT TCCAGGACGT CGTCAACGAG 
CCGGTAGAGG GCATGAAGCC CTACACCGCC CTGCAACTGG AAGGGCGCGA TATCTATATC 
AAGGAGGGCT GCGTCAGCTG TCACTCGCAG ATGGTTCGCC CGTTCCGCGC CGAAACCGAA 
CGTTATGGCC ACTACTCGGT TGCCGGCGAG AGCGTCTGGG ACCATCCGTT CCTCTGGGGC 
TCCAAGCGTA CCGGTCCCGA TCTGGCCCGC GTAGGTGGCC GCTACTCCGA CGACTGGCAT 
CGCGCGCACC TCTACAACCC GCGCAACGTG GTGCCGGAAT CGAAGATGCC CGCCTATCCC 
TGGCTGGTCG AGAACAAGCT GACCGGCGAG AAGACGGCCG ACAAGATGGA AGCCATGCGC 
ACCCTCGGCG TGCCCTATTC CGACGAGGAC ATCGCCGGTG CCCGGGCGTC GGTCAAGGGC 
AAGACCGAAA TGGATGCCCT GGTGGCCTAT CTCCAGATTC TCGGCACCTC CATCAAAACC 
AAACGGTAA 

 

Protein sequence

MKHETLEKNI GLLGLFMVAA VSIGGLTQIV PLFFQDVVNE PVEGMKPYTA LQLEGRDIYI 
KEGCVSCHSQ MVRPFRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR VGGRYSDDWH 
RAHLYNPRNV VPESKMPAYP WLVENKLTGE KTADKMEAMR TLGVPYSDED IAGARASVKG 
KTEMDALVAY LQILGTSIKT KR