Gene Avin_19980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19980 
SymbolccoP 
ID7760928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1985706 
End bp1986626 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content59% 
IMG OID643804896 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_002799180 
Protein GI226944107 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.181448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAT TCTGGAGTTC GTACATCACT CTACTTACCG TCGGAACCCT CGTTGCCGTT 
ACCTGGTTGC TCTTTGCGAC CCGCAAAGGC GAACGCAAGG GCACCACCGA CCAGACCATG
GGACACGCCT TCGACGGGAT CGAGGAGTAT GACAACCCAT TGCCCAAGTG GTGGTTCTGG
CTGTTCCTCG GCACCGTGAT CTTCGCGGTC GGCTACCTGG CCCTCTATCC GGGTCTGGGT
AACTGGAAAG GCGTACTGCC CGGCTACGAG GAAGGCTGGA CCGGCGTCAA TCAATACCAG
AAGGAAATGG CCAAGGCCGA CGAGCAATAT GGTCCGCTGT TCCAGAAATA CGCCGCCATG
CCGATCGAGG AAGTAGCCAA GCAGGAACAA GCCCTGAAGA TGGGGGGACG CATCTTTGCC
TCCAACTGTT CCGTGTGCCA TGGCTCCGAT GCCAAGGGCG CCTACGGCTT CCCCAACCTG
ACGGACAACG ACTGGCTGTA TGGCGGTGAG CCGGAAACCA TCAAGACCAC CATCATGGAG
GGTCGCAAGG CTGCCATGCC GGCATGGAAA GACGTGATTG GCGAGGAAGG TATCAAGAAC
ACTGCGGCCT ACGTGCGCAG CCTGTCCAAT CTCAAGGCCC CGGAAGGCGT GGAAGTCGAC
CTGGCCGAAG GCCAGAAGAT CTTCCAGACC AACTGTGTGG TCTGCCATGG CCCCGAGGGC
AAGGGAGTCC ATGCCATGGG TGCTCCCAAC CTGACCGACC GCGTATGGCT CTACGGCTCC
AGCTTCGCCC AGGTCCAGCA GACCCTGCGC CATGGACGCA ACGGCAACAT GCCAGCCCAC
AAGGACTTTC TGGGCAACGA CAAGGCACAC CTGGTAGCCG CCTACGTGTA TAGCCTGTCG
AACAAAGCCA CGGAGAAATG A
 
Protein sequence
MTSFWSSYIT LLTVGTLVAV TWLLFATRKG ERKGTTDQTM GHAFDGIEEY DNPLPKWWFW 
LFLGTVIFAV GYLALYPGLG NWKGVLPGYE EGWTGVNQYQ KEMAKADEQY GPLFQKYAAM
PIEEVAKQEQ ALKMGGRIFA SNCSVCHGSD AKGAYGFPNL TDNDWLYGGE PETIKTTIME
GRKAAMPAWK DVIGEEGIKN TAAYVRSLSN LKAPEGVEVD LAEGQKIFQT NCVVCHGPEG
KGVHAMGAPN LTDRVWLYGS SFAQVQQTLR HGRNGNMPAH KDFLGNDKAH LVAAYVYSLS
NKATEK