Gene Avin_19890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19890 
SymbolcydA 
ID7760920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1975522 
End bp1977135 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content60% 
IMG OID643804888 
ProductCytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_002799172 
Protein GI226944099 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCGG AATCCGTCGT AGACCTATCG CGTCTGCAGT TCGCCATGAC GGCGCTGTAC 
CATTTCCTAT TCGTACCACT AACCCTAGGG ATGACCTTCC TGCTCGCCAT CATGGAGTCG
GTCTACGTAA TGACCGGCAA GCAGGTCTAC AAGGACATGG TGAAGTTCTG GGGCAAGCTG
TTCGGCATCA ACTTCGCCCT CGGTGTCACC ACCGGCATTA CCATGGAGTT CCAGTTCGGC
ACCAACTGGG CCTACTACTC CCACTATGTG GGTGACATCT TCGGTGCGCC GCTGGCCATC
GAGGGTCTGA CGGCCTTCTT CCTGGAGTCC ACTTTCATCG GCATGTTCTT CTTCGGCTGG
GATCGCCTGT CGAAGATCCA GCACCTGGCG GTGACCTGGC TGGTAGCGTT GGGTTCCAAC
CTGTCGGCCC TGTGGATCCT GGTCGCCAAC GGCTGGATGC AGCACCCGGT CGGTGCGGAG
TTCAACTTCG AGACCATGCG GATGGAACTG GTGGACTTCG GCGCCCTGCT GCTGAACCCC
GTTGCCCAGG TCAAGTTCGT CCACACCGTC GCCTCCGGCT ATGTGACCGG CGCTGTGTTC
GTCCTGGCCA TCTCCAGCTA CTACCTGCTG AAAAAACGCG ATCTGGGCTT CGCCCGCCGC
TCCTTCGCCA TCGCCTCCGC CTTCGGTATG GCTTCCATTC TGTCGGTAAT CGTGCTCGGT
GACGAATCCG GCTACGAAGT GGGCGAAGTG CAAAAAGCCA AGCTCGCCGC TATCGAAGCC
GAATGGGAAA CCCATCCGGC ACCGGCCAGC TTCACCCTGA TCGGCTTCCC GAACGAGGAA
GAACAGCGCA CCGATTTCGC AGTGAAAATC CCGTGGGTCC TGGGCATCAT CGCCACCCGC
TCGCTGGATG AACAAGTCAT TGGCATCAAG GATCTGATCG CCGATCACGA GGCCCGTATC
CGCAACGGCA TGGTCGCCTA TGGCCTGCTC GAGGAGCTGC GTGCCGGCAA CAAGAGCCCG
GAGAAAATCG CAGCCTTCAA CGAGGTCAAG GATGATCTGG GCTATGGCCT GCTCCTGAAG
AAGTACACCC CGAACGTGGT CGACGCCTCC GAAGAGCAGA TCAAGCAAGC GGCCAAGGAC
ACCATTCCCA GCGTGGCCAG CATGTTCTGG AGCTTCCGCG CCATGGTCGG CGCCGGCTTC
GCGATGCTCA TCCTGTTTGT CTGCGCCTTC TGGGCCTCCG CTCGCAAGAA CGAGGAATCC
AAGCCCTGGC TGCTCAAGTT CGCCCTGTAC AGCCTGCCGC TGCCCTGGAT CGCAACCCAG
ACCGGCTGGT TCGTGGCCGA GCACGGTCGT CAGCCCTGGA CCATCGGTGG TGTGCTGCCC
ACCCATCTCT CCGCTTCCAG CCTGAGCACT GGCGACCTCT GGGGTTCTCT GATCGCGCTG
ATCGCGTTCT ATACGCTGCT GTTGGTGGTC GAGATGTACC TGATGATCCG CTTCGCTCGC
CTTGGCCCGT CCAGCCTGCA TACCGGCCGC TACCACTTCG AGCAGCTTGA GCAACATGCT
GTCAAGCATG CCAGCCCGAG CCAGGCGGAC CCCCAACAAC CAGTCAACGC CTAA
 
Protein sequence
MISESVVDLS RLQFAMTALY HFLFVPLTLG MTFLLAIMES VYVMTGKQVY KDMVKFWGKL 
FGINFALGVT TGITMEFQFG TNWAYYSHYV GDIFGAPLAI EGLTAFFLES TFIGMFFFGW
DRLSKIQHLA VTWLVALGSN LSALWILVAN GWMQHPVGAE FNFETMRMEL VDFGALLLNP
VAQVKFVHTV ASGYVTGAVF VLAISSYYLL KKRDLGFARR SFAIASAFGM ASILSVIVLG
DESGYEVGEV QKAKLAAIEA EWETHPAPAS FTLIGFPNEE EQRTDFAVKI PWVLGIIATR
SLDEQVIGIK DLIADHEARI RNGMVAYGLL EELRAGNKSP EKIAAFNEVK DDLGYGLLLK
KYTPNVVDAS EEQIKQAAKD TIPSVASMFW SFRAMVGAGF AMLILFVCAF WASARKNEES
KPWLLKFALY SLPLPWIATQ TGWFVAEHGR QPWTIGGVLP THLSASSLST GDLWGSLIAL
IAFYTLLLVV EMYLMIRFAR LGPSSLHTGR YHFEQLEQHA VKHASPSQAD PQQPVNA