| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_19810 |
|---|
| Symbol | |
|---|
| ID | 7760913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1968383 |
|---|
| End bp | 1969171 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643804881 |
|---|
| Product | hydroxypyruvate isomerase protein |
|---|
| Protein accession | YP_002799165 |
|---|
| Protein GI | 226944092 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAG CCGCCAACCT TTCCCTGCTG TTCAGCGAGA AACCCTTGCT CGAACGCATC
GTGGCCGCTG CGGCGGCGGG CTTCGACGGT GTCGAGATCC AGTTTCCTTA CGAGATCCCG
GCCATCCGCC TAAAGGAGGA GCTGGAGCGG GCCGGGATGC CGCTGGTGTT GATCAACCTG
CCGGCCGCCG ATTTCCTGCA GGGAGGTCCG GGGCTGGCCG CGGTTCCGCA GCGGCAGGCG
GAGTTCGATG CCGCATTGCA ACTGGCGCTG AGTTATGCCG CGATGGTTCG GCCGGATTGC
GTCAATATCC TGCCGGGGCG CCTGGCCGAG GGGGTGGCTC CGGAGCTGGC CCTGGCGACT
CTGGAGTCCA ACCTGGCCAG GGCGGCCGAA GCCTTCTCGG TGCTGGGGAT CACCGTGGTC
TGCGAGGCGA TCAACCCGCT GGACGTACCG GGCTTTCTGG TCAACACAGC CGAACAACTG
GATGCCTTGC TGCGGCGCGT GGACCATCCC AACTGTCTGG CCCAACTGGA TCTCTACCAT
ATGGCCCGCC AGGGGCTGGA CCTTCCGGAC TGCATCGCCC GCCTGGCCGG GCGCATCGGC
CATGTGCAGT TCGCCGATTG TCCGGGACGG GGTGAGCCGG GCAGCGGACA GGTGGATTTC
GCCGCGGCCC TGGCCGCCTT GCAGGCGAGC GGCTACCGGG GCTGGCTCGG CGCCGAATAC
CGCCCGGCCG GCGCGAGCCG CGACAGCCTG GCTTGGCTGG CGCGCTGGCG GGCGGGAAAT
TATCGCTGA
|
|---|
| Protein sequence | MQIAANLSLL FSEKPLLERI VAAAAAGFDG VEIQFPYEIP AIRLKEELER AGMPLVLINL
PAADFLQGGP GLAAVPQRQA EFDAALQLAL SYAAMVRPDC VNILPGRLAE GVAPELALAT
LESNLARAAE AFSVLGITVV CEAINPLDVP GFLVNTAEQL DALLRRVDHP NCLAQLDLYH
MARQGLDLPD CIARLAGRIG HVQFADCPGR GEPGSGQVDF AAALAALQAS GYRGWLGAEY
RPAGASRDSL AWLARWRAGN YR
|
|---|
| |