Gene Avin_19640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19640 
Symbol 
ID7760896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1955178 
End bp1956101 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID643804864 
Producthigh affinity branched chain amino acid ABC transporter, permease component 
Protein accessionYP_002799148 
Protein GI226944075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0105896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGATC TCTACCACTA CCTGCAACAA CTGGTGAACG GCCTGACGGT CGGCAGCACC 
TATGCGCTGA TCGCCATCGG CTACACCATG GTCTACGGCA TCATCGGCAT GATCAACTTC
GCCCACGGCG AGGTGTACAT GATCGCCTCC TATGTGGCCT TCATCGTCAT CGCCGGACTG
TCCATGCTCG GCCTGGACCA GTTGCCGCTG CTGATGGCCG GCGCCTTCGC CGCGAGCATC
GTGGTCGCCA GCGCCTACGG CTATTCCATC GAGCGCATCG CCTACCGCCC GCTGCGCGGC
GGCAACCGGT TGATCCCGCT GATTTCGGCG ATCGGCATGT CGATCTTCCT GCAGAACGAG
GTCCTGCTGT CCCAGGGCTC GCGCGACAAG GCGATCCCCA GCCTGCTGCC GGGCAACCTG
GTCATCGGCG AAAGCGCCAT GCACGGCGTG GTGATCTCCT GGATACAGAT GCTGATCTTC
GCCGTCACCC TGCTGGTCAT GCTCGGTCTC CACCTGTTCA TCTCCCGTTC GCGCCTCGGC
CGCGCCTGCC GCGCCTGTGC CGAGGACCTG AAGATGGCCG GCCTGCTGGG CATCGACACC
CACCGGATCA TCGCCCTGAC CTTCGTCATC GGCGCCGCCC TGGCCGCGGT GGCCGCGGTG
CTGCTGGGCC TGCAGTACGG GGTGATCAAC CCGCAACAGG GCTTTCTCGC CGGCATCAAG
GCGTTCACCG CCGCGGTGCT CGGCGGCATC GGCAGCATTC CCGGGGCCAT GCTCGGCGGC
CTGCTGCTGG GAGTCGCCGA AGCCTTCGGC GCCGACCTGT TCGGCGATCC GTACAAGGAT
GTGGTGGCCT TCGGCCTGCT GATACTGGTG CTGTTGTTCC GCCCCACCGG CATTCTCGGT
CGCCCGGAGG TGGAGAAGGT ATGA
 
Protein sequence
MPDLYHYLQQ LVNGLTVGST YALIAIGYTM VYGIIGMINF AHGEVYMIAS YVAFIVIAGL 
SMLGLDQLPL LMAGAFAASI VVASAYGYSI ERIAYRPLRG GNRLIPLISA IGMSIFLQNE
VLLSQGSRDK AIPSLLPGNL VIGESAMHGV VISWIQMLIF AVTLLVMLGL HLFISRSRLG
RACRACAEDL KMAGLLGIDT HRIIALTFVI GAALAAVAAV LLGLQYGVIN PQQGFLAGIK
AFTAAVLGGI GSIPGAMLGG LLLGVAEAFG ADLFGDPYKD VVAFGLLILV LLFRPTGILG
RPEVEKV