Gene Avin_19610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19610 
Symbol 
ID7760893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1952460 
End bp1953161 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID643804861 
Producthigh affinity branched chain amino acid ABC transporter, ATP binding component 
Protein accessionYP_002799145 
Protein GI226944072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0847602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACGCT TCGACAACGT TTCCACCTGC TACGGCAAGA TCCAGGCGCT CCACGGAGTG 
AGCCTGGAGG TGCGCGAAGG CGAGATCGTC ACCCTGATCG GCGCCAACGG CGCCGGCAAG
TCGACCCTGC TGATGACCCT CTGCGGCACG CCGCGGGCCA GCGCCGGGAG CATCCGCTAC
CGCGGCGAGG AACTGGTCGG CCAGGATACC GGCGCGATCA TGCGCAAGGG CATCGCAGTG
GTCCCGGAAG GCCGGCGCAT CTTCGCCCGC CTGACGGTCG AGGAGAACCT CGCGATGGGC
GGCTTCTTCG CCGGCCGGGG AGAAGTCGAA GAGCGCCTGG AGCGCGTGCT GGAACTCTTC
CCGCGGCTGA GGGAGCGCTA CGCCCAGCGC GGCGGCACCC TGTCCGGCGG CGAGCAGCAG
ATGCTCGCCA TCGGCCGCGC GCTGATGAGC CGGCCGCGCC TGCTGCTGCT CGACGAACCC
TCCCTGGGCC TGGCGCCGCT GATCATCCAG CGGATCTTCG CGATCATCGA GCAATTGCGC
GAGAAAGGCG TCACGGTCTT CCTGGTCGAG CAGAACGCCA ACCAGGCGCT CAAGCTGGCC
GACCGCGGCT ACGTGCTGGA GAACGGGCGG ATCGTCATGC AGGGCACGGG CGAGGAACTG
CTCGGCGATG CGCGGGTATG CGAGGCCTAC CTGGGCGGCT GA
 
Protein sequence
MLRFDNVSTC YGKIQALHGV SLEVREGEIV TLIGANGAGK STLLMTLCGT PRASAGSIRY 
RGEELVGQDT GAIMRKGIAV VPEGRRIFAR LTVEENLAMG GFFAGRGEVE ERLERVLELF
PRLRERYAQR GGTLSGGEQQ MLAIGRALMS RPRLLLLDEP SLGLAPLIIQ RIFAIIEQLR
EKGVTVFLVE QNANQALKLA DRGYVLENGR IVMQGTGEEL LGDARVCEAY LGG