| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_19530 |
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| Symbol | shaAB |
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| ID | 7760885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1945526 |
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| End bp | 1948321 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643804853 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_002799137 |
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| Protein GI | 226944064 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR00807] malonate transporter, MadL subunit
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.571752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATGA TGCTCGCGTT GCTCGTTGCC TTGCCCTTTC TCGGTATCTG CCTGCCGCTG
CTGGCCGCTC GCCATGGGCG GTCACCGTGC GCGGCAGCCG CTGCGCTGGC TCCTTTGCTG
GGCTTGATCC TGCTGTTTTT CCTGGGGCCG CCGGTGTTCG CCGGAGCCAC GCTCAAGAGC
GGCAGCCCCT GGCTGCCCGA ACTGGGTCTG AGTCTCAGCC TGCGTCTGGA TGGCCTGGGC
TTTCTCTTCG CCCTGCTGAT TCTCGGCATC GGCATTCTGG TCATCCTCTA CGCCCGCTAC
TACCTGGCCG ACCACGAGCC GATGGGACGC TTCTTCGCCT TCCTGTTGCT GTTCATGGGC
GCCATGCTGG GACTGGTGCT GTCGGAAAAC CTGCTGCTAA TGCTGATGTT CTGGGAACTG
ACCAGCCTCG CCTCGTTCCT GCTGATCGGC TTCTGGCATC ACCGCTCGGA TGCCCGCCGC
GGGGCGCGCA TGGCCCTGGT GGTGACCGGC GGCGGGGGGC TGGCGCTGCT CGCCGGGGTG
TTGCTGATCG GCCACATCGT CGGCAGCTTC GAGCTGAGCG AGGTGCTCGT CGCCGGCGAG
GCGATCCGTG CCCACGCTCT CTATCCGGCG GCGCTGATGC TGGTGCTGCT CGGTGTGTTC
AGCAAGTCGG CACAGTTCCC CTTGCACTTC TGGCTAGCGC AGGCGATGGC GGCGCCGACC
CCGGTGTCCG CCTACCTGCA CTCGGCGACC ATGGTCAAGG CCGGGGTCTT CCTCCTGGCC
CGCCTGTATC CGGCCCTGTC CGGCAGCGAC TGGTGGTTCT ACCCGGTCAG CCTGAGCGGC
CTGGCGACCC TGCTGCTGGG CGCGCTGACG GCCCTGTTCC AGCACGACCT CAAGGGCCTG
CTGGCCTATT CGACCATCAG CCACCTGGGC CTGATCACCC TGCTGTTCGG CCTGGATTCG
GATCTGGCGA ACGTGGCGGC GCTGTTCCAT GTCATCAACC ACGCGACTTT CAAGGCCTCG
CTGTTCATGG CGGCCGGCAT CATCGACCAC GAGACCGGCA GCCGCGACAT GCGGCGCATC
AACGGCATGT GGAAATACAT GCCGCACACC GCCACGCTGG CCATGGTGGC CAGCGCGGCG
ATGGCCGGCG TGCCCCTGCT CAACGGTTTC CTGAGCAAGG AGATGTTCTT CAGCGAGATA
CTGCAGCAGA ATCTGCTGGG CAGCTTCCAC TGGCTGCTGC CGGTGGCCGC GACCATCGCC
GGAGTGTTCT CGGTGGCTTA TTCGCTGCGC TTCATCCATG GGGTGTTCTT CAACGGCGAA
CCCGGCGACC TGCCCAGGCC CGATCCCCAC GAGCCGCCGC ACTACATGCG GATTCCGGTC
GAGGTGCTGG TGTTCCTCTG CCTGCTGGTG GGTATCCTGC CGGACTGGAG CGTGGGGCCG
CTGCTGGCCG TGGCGGCTTC GGCCAGCCTC GGCGGGGAGC TGCCGGCCTA CAGCCTGGCG
ATCTGGCACG GTTTCAACCT GCCGCTGGCG ATGAGTGCCG TCGCTTTATC CGGCGGTGTG
CTGGTGCATG TCCTGCGCCA GCCACTGTTG CGCTGGTACG AAGGCCTTCC GGATCTGGAT
GCGCAGGCGC TGTTTCGTGG CGGCATCGGC GTGCTGGTGG ACTTCTCCCG CGGACTCACC
GGCGTGCTGG AGAACGGCTC GCTGCAGCGC TATCTCGCCC TGCTGCTGGG TAGCGTACTG
GTACTGGCGG TGTTCGCCCT GGCGCCGCTG GCCGAGGTCG ACGGTCCGGT AGCGCTGGGC
CCGGTCGATG GCATCGGTAC GCTGGTGCTG GGCGCGCTGG CCCTGACCGG CCTGTTCGGC
GCGGCGTTCC ACCGCAATCA TCTGGCCGCC CTGCTGGTCA TCAGTGGTAG CGGGCTGCTG
GTGGCCCTGG TCTTCGCCCG CTTCTCGGCC CCCGATCTGG CACTGACCCA ACTGGCGGTG
GAGATGGTGA CCATCGTCCT GCTGCTGCTC GCGCTGTTCT TCCTGCCCGA ACGCTCGCCG
CCCGAGTCGG ACAGCCTGCG GCTGCTGCGC GACCTTCTGC TGGCGGCCGC CAGCGGCATA
CTGGTGGCGC TGCTCGTCTA TGCGGTGCTG ACCCGCCCCT ACGAAAGCAT CGCCGCCTTC
TTCCTGGAAA ACAGCCTGAC TGGCGGCGGT GGTGCCAACG TGGTCAACGT GATCCTGGTG
GACTTCCGCG GCTTCGATAC CCTGGGCGAG ATCAGTGTGC TGGCCATCGC CGCGGTAGGT
GTCTCCGCCC TGCTGCACGG CCTGCACCTG CCGCATCCGC CAGTCGACCG GGAGCGGCCC
CGGTCCGCCG ACCATCACCC GCTGATCCTC CGGCAACTGG CGCGCGCGCT GTTGCCGATG
GCCATGCTGC TCTCGGCATT CCTCTTCCTG CGCGGACACA ACCTGCCGGG CGGCGGCTTC
ATCGCCGGAT TGGTCACCGC GGTGGCCCTG ATCCTGCAGT GCATCGCCCT CGGCCTGTCC
TGGGCCGGGG CTCGCCTGCG TTTCAGTTTC CACGCCATGG CCGCTGCCGG GCTGCTGCTC
GCCGCGCTCA CCGGGCTGGG TAGCTGGGCC TTCGGGCGGC CCTTCCTGAC CTCGGCGTTC
GGCCATTTCA GCCTGCCGCT GATCGGCGAC TTCGAGCTGG CCACGGCGAT GCTCTTCGAT
CTGGGGGTAT ATCTGGTAGT GGTCGGCGCG GCCCTGTCGA TCCTGTGCGG CATCGGTCAT
GTCGGCCGGG ATGCACCGAG GGGGGAGGTG TCCTGA
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| Protein sequence | MPMMLALLVA LPFLGICLPL LAARHGRSPC AAAAALAPLL GLILLFFLGP PVFAGATLKS
GSPWLPELGL SLSLRLDGLG FLFALLILGI GILVILYARY YLADHEPMGR FFAFLLLFMG
AMLGLVLSEN LLLMLMFWEL TSLASFLLIG FWHHRSDARR GARMALVVTG GGGLALLAGV
LLIGHIVGSF ELSEVLVAGE AIRAHALYPA ALMLVLLGVF SKSAQFPLHF WLAQAMAAPT
PVSAYLHSAT MVKAGVFLLA RLYPALSGSD WWFYPVSLSG LATLLLGALT ALFQHDLKGL
LAYSTISHLG LITLLFGLDS DLANVAALFH VINHATFKAS LFMAAGIIDH ETGSRDMRRI
NGMWKYMPHT ATLAMVASAA MAGVPLLNGF LSKEMFFSEI LQQNLLGSFH WLLPVAATIA
GVFSVAYSLR FIHGVFFNGE PGDLPRPDPH EPPHYMRIPV EVLVFLCLLV GILPDWSVGP
LLAVAASASL GGELPAYSLA IWHGFNLPLA MSAVALSGGV LVHVLRQPLL RWYEGLPDLD
AQALFRGGIG VLVDFSRGLT GVLENGSLQR YLALLLGSVL VLAVFALAPL AEVDGPVALG
PVDGIGTLVL GALALTGLFG AAFHRNHLAA LLVISGSGLL VALVFARFSA PDLALTQLAV
EMVTIVLLLL ALFFLPERSP PESDSLRLLR DLLLAAASGI LVALLVYAVL TRPYESIAAF
FLENSLTGGG GANVVNVILV DFRGFDTLGE ISVLAIAAVG VSALLHGLHL PHPPVDRERP
RSADHHPLIL RQLARALLPM AMLLSAFLFL RGHNLPGGGF IAGLVTAVAL ILQCIALGLS
WAGARLRFSF HAMAAAGLLL AALTGLGSWA FGRPFLTSAF GHFSLPLIGD FELATAMLFD
LGVYLVVVGA ALSILCGIGH VGRDAPRGEV S
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