Gene Avin_19500 details

Gene Information

• Locus tag: Avin_19500
• Symbol: pdxH
• ID: 7760882
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1943672
• End bp: 1944319
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643804850
• Product: pyridoxamine 5'-phosphate oxidase
• Protein accession: YP_002799134
• Protein GI: 226944061
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0259] Pyridoxamine-phosphate oxidase
• TIGRFAM ID: [TIGR00558] pyridoxamine-phosphate oxidase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.187849
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCAGA CACTGGCCGA CATGCGCCGT GACTATAGCC GCTCCGGCCT TTGCGAGGCC 
GAAGCCCCGC TCGAACCCTT TTCTTTGTTC CATCAGTGGT TCGCCGAGGC GATGAAGACC 
GAGCAGTTGC CTGTCGAGCC CAACGCCATG AGTCTGGCCA CCGTGGACGG CAACGGTCGG 
CCCCATTGCC GGGTGCTGCT GCTGAAGGGC GTGGACGAGC GGGGCTTCAC CTTCTTCAGC 
AACTACGAGA GCGCCAAAGG GCAGCAGCTT AGAGCGCGAC CCTTCGCCGC CATGACCTTC 
TTCTGGCCCA CCCTGGAACG TCAGGTGCGC ATCGAGGGAG AAGTCGAAAA GGTTTCGTCG 
CAGGAGTCCG ACGCTTACTT CCAGGTGCGT CCCCTGGGTA GTCGCCTCGG CGCCTGGGCT 
TCGCCACAGA GTCGGGTGAT CCGCGACCGC ACCGAGCTGG AAGAACTGCT GGCGTTGACC 
GAGAAGCGCT TTCTCGATCA GGCGCCGCAT TGTCCCGGAC ACTGGGGCGG TTACCGCCTG 
CTGCCCGATC GCATCGAGTT CTGGCAGGGG CGCGCCAGCC GCCTGCACGA CCGGCTCAAC 
TACCGTCTGG AGAAGGGTGG CTGGGTGCGC GAGCGCCTGG CGCCCTAG 

 

Protein sequence

MPQTLADMRR DYSRSGLCEA EAPLEPFSLF HQWFAEAMKT EQLPVEPNAM SLATVDGNGR 
PHCRVLLLKG VDERGFTFFS NYESAKGQQL RARPFAAMTF FWPTLERQVR IEGEVEKVSS 
QESDAYFQVR PLGSRLGAWA SPQSRVIRDR TELEELLALT EKRFLDQAPH CPGHWGGYRL 
LPDRIEFWQG RASRLHDRLN YRLEKGGWVR ERLAP