| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_19250 |
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| Symbol | rnfC |
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| ID | 7760859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1918812 |
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| End bp | 1920878 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643804827 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_002799111 |
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| Protein GI | 226944038 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG CGAAACTCTG GGAATTCCAG GGTGGCATTC ACCCACCGGA ACGCAAGGAA
CTCTCCAACC GCACGCCGAT CCAGAGGGTG CCGTTGCCCG CGCGTCTGAT CCTGCCGCTC
GGACAGCACA TCGGCACCCC GGCCGAGCCG ATCGTCACGG TCGGCGAGCG GGTCCTCAAG
GGCCAGCCGA TCGCCACAGC CAGCGGACGG GTCAGCGCGC CGCTGCACGC TCCGACCTCC
GGCACGGTGA GCTTCATCGG CATGCAACCC TATCCCCACG TTTCCGGCCT GCTCGCACCG
GCCATCGTCA TCGATAGCGA CGGCCTGGAT GAATGGACCG CCCTGGAGCC TTGCGCCGAC
CATCGCAGCC TGGAGCCGGC GATATTGCTG GAGAGAATTC GCCAGGCCGG CATCAGCGGC
CTGGGCGGCG CCGGCTTCCC CACGGCGGTG AAGCTGACGG CACGCCCGCA GCGGAAGATC
CACACGCTGA TCGTCAACGG TGCCGAATGC GAGCCCTATA TCACTGCCGA TGACCGGCTG
ATGCGAGAGA GAGCGGCCGA GCTGATTATC GGCATCGATA TCCTCGTGCA ACTGATCGAA
CCCGAGCAGG TGCTCATCGG TATCGAGGAC AACAAGCCCG AGGCGGTCGC CGCGGTGCGC
GCCGCCCTCG GCGAGCGGTC GTTCGGGCTG CGGGTACTGC CGACCAAGTA TCCGTCCGGC
GGCGAACGGC AACTGATCGA GATCCTCACC GGCCGACAGG TGCCGAGCGG CGGCCTGCCG
GCGGACATCG GCATGCTCTG CCAGAACGTC GGCACCTGTG TCGCCATCCA TGACACGGTA
CTCCTGGGAC GGCCGCTGAT CTCGCGCATC GTCACCCTGA CCGGCGAAGC CCTGGCCCGG
CCGATGAACG TCGAGGCCCT GCTCGGCACG CCGGTGGGCG AACTGCTGGC TTTCGCCGGG
CTGGATGAGG CGCGCATGGA CCGCCTGATC ATGGGCGGCC CGATGATGGG CTTCACCCTG
TCCTCGCTCG ACGTGCCCCT GATCAAGACC GCTAACTGCC TGCTGGCACC GACCCGCAGC
GAGTTGCCGC CTCCGCCACC GGCGCTGCCG TGCATTCGCT GCGGTGCCTG CGCCGATGTC
TGTCCGGCCA GCCTGCTGCC GCAGCAACTG CATTTCTTCG CCCTCGGTCG GGAACACGAG
CAACTCAGGG CATACAACCT GTTCGACTGC ATCGAATGCG GCGCCTGTGC TTACGTCTGT
CCCTCCAGCC TGCCGCTGGT GCAGTACTAC CGTGTGGCCA AGGCGGAAAT CCGCGAACTG
GAGCAGAAGC GGCACAAGGC CGGACACTCC AGGCTACGTT TCGAGCTGCG CCAGGAGCGC
CTGCGCAAGT CCGAGGAACA GAAGGAAGCA GAACGCCGGG CTCGCGTCGA AAAGGCCGCC
CGGGCCAGGG CGGTACAGGC GGAAAGCAGC TCGGTGCCCC ATCAGGAAAC CTCGCTTGCC
AGCCGGCCGA CCGGACTCTC CGAGCACCAG AAAAAGCTGA AGATCGAGGC GAGCATGACC
CAAGTCGCCT TGAAAAAAGC CGAGAAGCAG CTCGCCGTCC ACCCGACGGC AGAGCTGGAA
GCCCAGGTCG CCGAACTGCG TGCCGCTGCC GAGGCGGCAC GCAAGGCACT GGAGGCGACT
ACTCCGGCAG CGCCGTCGGC AGGCAACGAC ACAGCGCTGA AGAAAGCCAA GATCGAGTTG
GCGATGAGGC GTACCGAGTT GAAGAAGGCC GAGAAGGCCA GTGTCGACGA CAGCGAACTG
GCACACCTGC GCGAGGCCCT GGCCGACGCC AAGCGGGCCC TGCATGCCGC CGAGGAGGCT
TCGGACAGGC CCGCACCGCA ATTGGTGCGG ATCGATAAAC GCCCGGTGGA TGAGAAGTTG
CGGGCCCTGA AGACCGAACT CGCCTTCGCC CGCGCCGACC TGCGCAAACT GGAACGCGAC
GAGACAATCG ATCCACCCGT GCTGGAGTCG GCCCGGACGC GCCTGGCCGA AGCCGAGCGC
CGGCTGGCGG GATACCAAAG CGAATGA
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| Protein sequence | MSEAKLWEFQ GGIHPPERKE LSNRTPIQRV PLPARLILPL GQHIGTPAEP IVTVGERVLK
GQPIATASGR VSAPLHAPTS GTVSFIGMQP YPHVSGLLAP AIVIDSDGLD EWTALEPCAD
HRSLEPAILL ERIRQAGISG LGGAGFPTAV KLTARPQRKI HTLIVNGAEC EPYITADDRL
MRERAAELII GIDILVQLIE PEQVLIGIED NKPEAVAAVR AALGERSFGL RVLPTKYPSG
GERQLIEILT GRQVPSGGLP ADIGMLCQNV GTCVAIHDTV LLGRPLISRI VTLTGEALAR
PMNVEALLGT PVGELLAFAG LDEARMDRLI MGGPMMGFTL SSLDVPLIKT ANCLLAPTRS
ELPPPPPALP CIRCGACADV CPASLLPQQL HFFALGREHE QLRAYNLFDC IECGACAYVC
PSSLPLVQYY RVAKAEIREL EQKRHKAGHS RLRFELRQER LRKSEEQKEA ERRARVEKAA
RARAVQAESS SVPHQETSLA SRPTGLSEHQ KKLKIEASMT QVALKKAEKQ LAVHPTAELE
AQVAELRAAA EAARKALEAT TPAAPSAGND TALKKAKIEL AMRRTELKKA EKASVDDSEL
AHLREALADA KRALHAAEEA SDRPAPQLVR IDKRPVDEKL RALKTELAFA RADLRKLERD
ETIDPPVLES ARTRLAEAER RLAGYQSE
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