Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_19100 |
Symbol | |
ID | 7760844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1896179 |
End bp | 1897090 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643804808 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002799097 |
Protein GI | 226944024 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.672089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCTGG ATCAATGGCG CACCCTGCAG GCGGTGGTCG ACCACGGCGG CTTCGCCCAG GCCGCCGAAG CGCTGCACCG TTCGCAGTCC TCGGTCAGCT ATGCGATCGC GCGCATGCAG GAGCAGCTGG GCGTGCCGCT GTTGCGCATC GAGGGACGCA AGGCGGTACT GACCGAAGCC GGAACCGTGC TGCTGCGCCG CTCGCGGCAA CTGCTCAAGC AGGCCGGCCA GTTGGAAGAC CTCGCCCACC ACATGGAACA GGGCTGGGAG GCCGAGGTGC GTCTGGTCGT GGATGCCGCC TATCCCACCT TGCGCCTGGT CCGCGCCCTG AGCGCCTTCA TGCCGCAGAG CCGAGGCTGT CGCGTGCGCC TGCGCGAGGA GGTGCTCTCC GGCGTCGAGG AAGTGCTGCT CGAGGGCGGA GCCGACCTGG CCATCTCCAG CCTGAGCATT TCCGGCTACC TGGGCAGTTC GCTGAGCGAG GTGGAATTCG TCGCCGTCGC CCACCCCGAC CATCCCCTGC ACCGTCCGCA GCGCACCCTG ACCGCGGCCG ATCTGGAAAG CCAGATGCAG GTGGTGATCC GCGACACCGG CCGCCGGCAG CCGCGCGACA TCGGCTGGCT CGGTGCCGAA CAGCGCTGGA CGGTGGGCAG CCTGGCCACC GCGGCGACCT TCGTCGGCAG TGGCCTGGGG TTCGCCTGGC TGCCCTGCCA CCTGATCCGC CGCGAACTCG CCGAAGGCCT GCTCAAGCCT CTGCCGCTGG CGGAAGGCGC GACCCATCGG CCGCGCTTTC AGCTCTACGC CGACAAGGAC AAACCCCTCG GCCCGGCCAC GCGGATTCTT GTGGAGCTGA TCAAGACTTT CGACAGCGCC CCGCTGGATG CCCCCTTCGC TGCCCCCCTG CCCGACGCCT GA
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Protein sequence | MTLDQWRTLQ AVVDHGGFAQ AAEALHRSQS SVSYAIARMQ EQLGVPLLRI EGRKAVLTEA GTVLLRRSRQ LLKQAGQLED LAHHMEQGWE AEVRLVVDAA YPTLRLVRAL SAFMPQSRGC RVRLREEVLS GVEEVLLEGG ADLAISSLSI SGYLGSSLSE VEFVAVAHPD HPLHRPQRTL TAADLESQMQ VVIRDTGRRQ PRDIGWLGAE QRWTVGSLAT AATFVGSGLG FAWLPCHLIR RELAEGLLKP LPLAEGATHR PRFQLYADKD KPLGPATRIL VELIKTFDSA PLDAPFAAPL PDA
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