Gene Avin_19100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19100 
Symbol 
ID7760844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1896179 
End bp1897090 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID643804808 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002799097 
Protein GI226944024 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.672089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCTGG ATCAATGGCG CACCCTGCAG GCGGTGGTCG ACCACGGCGG CTTCGCCCAG 
GCCGCCGAAG CGCTGCACCG TTCGCAGTCC TCGGTCAGCT ATGCGATCGC GCGCATGCAG
GAGCAGCTGG GCGTGCCGCT GTTGCGCATC GAGGGACGCA AGGCGGTACT GACCGAAGCC
GGAACCGTGC TGCTGCGCCG CTCGCGGCAA CTGCTCAAGC AGGCCGGCCA GTTGGAAGAC
CTCGCCCACC ACATGGAACA GGGCTGGGAG GCCGAGGTGC GTCTGGTCGT GGATGCCGCC
TATCCCACCT TGCGCCTGGT CCGCGCCCTG AGCGCCTTCA TGCCGCAGAG CCGAGGCTGT
CGCGTGCGCC TGCGCGAGGA GGTGCTCTCC GGCGTCGAGG AAGTGCTGCT CGAGGGCGGA
GCCGACCTGG CCATCTCCAG CCTGAGCATT TCCGGCTACC TGGGCAGTTC GCTGAGCGAG
GTGGAATTCG TCGCCGTCGC CCACCCCGAC CATCCCCTGC ACCGTCCGCA GCGCACCCTG
ACCGCGGCCG ATCTGGAAAG CCAGATGCAG GTGGTGATCC GCGACACCGG CCGCCGGCAG
CCGCGCGACA TCGGCTGGCT CGGTGCCGAA CAGCGCTGGA CGGTGGGCAG CCTGGCCACC
GCGGCGACCT TCGTCGGCAG TGGCCTGGGG TTCGCCTGGC TGCCCTGCCA CCTGATCCGC
CGCGAACTCG CCGAAGGCCT GCTCAAGCCT CTGCCGCTGG CGGAAGGCGC GACCCATCGG
CCGCGCTTTC AGCTCTACGC CGACAAGGAC AAACCCCTCG GCCCGGCCAC GCGGATTCTT
GTGGAGCTGA TCAAGACTTT CGACAGCGCC CCGCTGGATG CCCCCTTCGC TGCCCCCCTG
CCCGACGCCT GA
 
Protein sequence
MTLDQWRTLQ AVVDHGGFAQ AAEALHRSQS SVSYAIARMQ EQLGVPLLRI EGRKAVLTEA 
GTVLLRRSRQ LLKQAGQLED LAHHMEQGWE AEVRLVVDAA YPTLRLVRAL SAFMPQSRGC
RVRLREEVLS GVEEVLLEGG ADLAISSLSI SGYLGSSLSE VEFVAVAHPD HPLHRPQRTL
TAADLESQMQ VVIRDTGRRQ PRDIGWLGAE QRWTVGSLAT AATFVGSGLG FAWLPCHLIR
RELAEGLLKP LPLAEGATHR PRFQLYADKD KPLGPATRIL VELIKTFDSA PLDAPFAAPL
PDA