| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_18940 |
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| Symbol | dacB |
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| ID | 7760828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1883661 |
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| End bp | 1885121 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643804792 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_002799081 |
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| Protein GI | 226944008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.480421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAA CCTTACGCCG GCTGGCTATC GCCAGCCTGC TGCTACCGCT CGCACTGTCG
GCGAGCGCGG CCCAGATCAA CACCACGCTG CCGAAGAATG TCCAGCAGGC GCTGAGCGCC
CACAAACTCC CGGGCGACGC CCTGTCCCTG GTGGTACTGC CACTCACCGG ACCCGGCGTC
CCGACCTACT TCAATGCCGA CGTGCCACTG AATCCGGCCT CGACCATGAA GCTGGTGACC
ACCTACGCCG CCCTCGAACT GCTCGGCCCG ACCCACAAGT GGCATACCGA GTTCTACGCC
GACGGCCCGC TGCAGGGCGG CGTGCTGAAT GGCAACCTGT ACCTGAAGGG CGGTGGCGAC
CCCAAGCTGA ACATGGAAAG GCTGTGGCTG CTGATGCGCG ACCTGCGCGC CAATGGCGTG
CGCGAAGTGC GCGGCGACCT GGTGCTCGAC CGCAGCCACT TCGTGCAGCC GCATCTGCCC
TCCTTCAACG ACGACGGCGG CGACAGCAAC AAGCCCTTCC TGGTCGAGCC CGACTCCCTG
CTGATCAACC TCAAGGCCCT GCGCTTCATC GCCCGCGCCG AGCCCGGCAA GGTACAGATC
AGCGTCGAGC CGCCGATCGC CGGCATGAGC ATCGACAATC AGGTGCAGGC GCTGCCGGCC
GGTGCCTGTC CGGACTGGCC GGACGTGCGC TACAACCTGA TCCCGCAGCA GAGCGGCTAC
AGCATGGTGG TCACCGGCAA GCTGCCGGCC GGCTGCAGCG CGCAGAGCTA CATCGCCCCG
CTCGACCATC AGACCTATGC CGCCGGCGCC GTGCGCGCCA TCTGGCAGGA GCTGGGCGGC
AGCATCCGCG GACAGGACCG CGTCGGCAAC GTGCCCCGGC AGGCGCAATT GCTGGTTCGC
GCCTCCTCGC CGGACATGGT CGAGATCATT CGCGACATCA ACAAGTTCAG CAACAACACC
ATGGCCCGGC AGTTGTTCCT CAGCATCGGC CGGCAGTACC GCAACGGCGC CGATGCCGAC
GACGCCCAGG CGGCCTACCG CGCGGTGCGC CAGTGGATGA CGCGCAAGGG CATCGACCCG
CGGCATCTGG TGATGGAGAA CGGTTCCGGC CTGTCGCGGA CCGAACGGAT CAGCGCCCGG
GAAATGGCCG AAATGCTCAA GGCCGCCTGG CACAGCCCCT ACGCCGCCGA GTTCATCGCC
TCCATGCCGC TGGTGGCGAT GGACGGCACC ATGCGCAAGC GCCTGCGCCG CACGCCCCTG
GTCGGCGAGG CGCACATCAA GACCGGCACC TTGAACACCG TGCGCGCCAT CTCCGGCTTC
AGCCGCGACC AGAACGGCAA CACCTGGGCG GTGGTCGCCA TCCTCAACCA CGCACGTCCC
TGGGGCGCCT CGTCGATTCT CGACCAGGTG CTGGTCGACC TGTACCGCCA GCCGAAGTCG
TCCACCACGG CCCAGCGCTG A
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| Protein sequence | MIATLRRLAI ASLLLPLALS ASAAQINTTL PKNVQQALSA HKLPGDALSL VVLPLTGPGV
PTYFNADVPL NPASTMKLVT TYAALELLGP THKWHTEFYA DGPLQGGVLN GNLYLKGGGD
PKLNMERLWL LMRDLRANGV REVRGDLVLD RSHFVQPHLP SFNDDGGDSN KPFLVEPDSL
LINLKALRFI ARAEPGKVQI SVEPPIAGMS IDNQVQALPA GACPDWPDVR YNLIPQQSGY
SMVVTGKLPA GCSAQSYIAP LDHQTYAAGA VRAIWQELGG SIRGQDRVGN VPRQAQLLVR
ASSPDMVEII RDINKFSNNT MARQLFLSIG RQYRNGADAD DAQAAYRAVR QWMTRKGIDP
RHLVMENGSG LSRTERISAR EMAEMLKAAW HSPYAAEFIA SMPLVAMDGT MRKRLRRTPL
VGEAHIKTGT LNTVRAISGF SRDQNGNTWA VVAILNHARP WGASSILDQV LVDLYRQPKS
STTAQR
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