| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_18450 |
|---|
| Symbol | |
|---|
| ID | 7760779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1826824 |
|---|
| End bp | 1827363 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643804743 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002799032 |
|---|
| Protein GI | 226943959 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAC TCACCGAGCA AGGTTTCGCG GCCACTGGCA TCGATACCGT GCTCAAGCGT
ATCCAAGTGC CCAAGGGGTC CTTCTACCAC TACTTCGACA GCAAGGAGGC GTTCGGCCAA
CAGGTCCTCG AGCGCTATGC CGCCTACTTC GCCCGCAAGC TCGACCGCTG GCTGCTGGAT
CAGGACGAAG CCCCGCTGCA GCGACTGCGG AATTTCGTCG AGGACGCGAA GGCCGGCATG
GCCCGGCACC AGTTCCGGCG CGGTTGCCTG GTCGGCAACC TGGGCCAGGA GGTCGTGGTC
CTGCCGGACA GCTTCCGCTG GCAGTTGGAG CAGGTCCTGC TCGATTGGCA ACAACGCCTT
GTCCGTTGCC TGAACGAGGC GGTCGAAGCG GGTGAGATCG CTCCCGGTAC CGACTGCAAC
GCCCTTGCGG CGTACTTCTG GATCGGCTGG GAAGGCGCCG TGCTACGCGC CAGGCTGGTC
CAGGGTATCC ATCCCCTGGA TGTCTTCATC CAGGGATTTC TGACTGGCAT CGAACGCTGA
|
|---|
| Protein sequence | MEILTEQGFA ATGIDTVLKR IQVPKGSFYH YFDSKEAFGQ QVLERYAAYF ARKLDRWLLD
QDEAPLQRLR NFVEDAKAGM ARHQFRRGCL VGNLGQEVVV LPDSFRWQLE QVLLDWQQRL
VRCLNEAVEA GEIAPGTDCN ALAAYFWIGW EGAVLRARLV QGIHPLDVFI QGFLTGIER
|
|---|
| |