Gene Avin_18310 details

Gene Information

• Locus tag: Avin_18310
• ID: 7760765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 1812985
• End bp: 1814985
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643804729
• Product: Peptidase, U32 family
• Protein accession: YP_002799018
• Protein GI: 226943945
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0826] Collagenase and related proteases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAC CCAAGCACCA TCTGGAACTG CTCAGCCCGG CACGGGATGT GTCCATCGCC 
AAGGAGGCGA TCCTGCATGG CGCCGATGCC GTGTACATCG GCGGCCCCAG CTTCGGTGCG 
CGGCACAGCG CCGGCAACGA TGTGACGGAT ATCGCCGGCC TGGTGGAGTT CGCCCACCAG 
TTCCACGCCC GGGTGTTCGT CACCCTCAAC ACCATCCTGC ACGACGACGA GCTGGAACCA 
GCCCGCCAGT TGATCTGGCA GCTACACGAC GCGGGCATCG ACGCGCTGAT CGTGCAGGAC 
ATGGGCATCC TGGAAATGGA CATTCCGCCC ATCGAGCTGC ACGCCAGCAC CCAGTGCGAC 
ATCCGCACCC TGGAAAAGGC GAAATTCCTG GCCGACGCCG GTTTCTCCCA ACTGGTGCTA 
GCGCGCGAAC TCGGCCTTGC GGAGGTCCGC GCCATCGGCG CGCGAGTGGA CTCGACCATC 
GAGTTCTTCA TCCACGGCGC GCTGTGCGTG GCCTTCTCCG GGCAGTGCTA CATCTCCCAC 
GCGCAGACCG GGCGCAGCGC CAACCGCGGC GACTGCTCGC AGGCCTGCCG GCTGCCCTAC 
ACCCTGAAGG ACGACCAGGG CCGGGTGGTG GCCTACGACA AGCACCTGCT GTCGATGAAG 
GACAACAACC AGAGCGCCAA CCTGCGCGCG CTGATTGATG CCGGGGTGCG CTCCTTCAAG 
ATCGAGGGAC GCTACAAGGA CATGGGCTAC GTGAAGAACA TCACCGCCTA CTACCGGCAA 
CGGCTCGACG AGGTCCTGAG CGAGCGCCCG GAGCTGGCAC GAGCCTCCAG CGGCCGGACC 
GAGCACTTCT TCGTGCCGGA CCCGGACAAG ACCTTCCACC GCGGCAGCAC GGACTACTTC 
GTCAACGAGC GCAGGATCGA CATCGGCGCC TTCGATTCGC CGACCTTCAC CGGCCTGCCG 
GTGGGCGAGA TACTCAAGGT CCGCAAGAAG GATTTCATCG CCGGCACCAC GGAGCCGCTC 
GGCAACGGCG ACGGCCTGAA CGTGCTGGTC AAGCGCGAAG TGGTGGGCTT CCGTGCCAGC 
GTCGTCGAAC AGCTCGAACG CTCCGAGCGG GGCGGCAAGC CCCACTGGCA ATACCGCATC 
GAGCCCAACG AGATGCCGGC CGCGCTGAAG CAGTTGCGTC CGCATCATGC GCTGAACCGC 
AACCTGGACC ACGACTGGCA GCAGGCGCTG CAGAAGACTT CCGCCGAGCG CCGGGTCGGG 
GTGCGCTGGC AGGTCCGGCT GACGGAGGAG GCACTCGACC TGAACGTGAC CAGCGAGGAA 
GGCGTCGGCG CTTCGGCGAG TCTCGCCGGG CCCTTCGGAC TGGCGAAGAA GCCGGAACAG 
GCGCTCGAGC AGTTGCGCGA CCTGCTCGGT CAATTGGGCA CCACCCTCTA CCATGCCGAA 
GAAGTGGAGA TCGATGCACC GCAGGCATTC TTCGTCCCGA ACTCCCTGCT CAAGGCCCTG 
CGCCGCGAGG CCATCGAGGC CCTGACTGCC GCCCGCCTGG CCACCCACCG GCGCGGCAGC 
CGCAAGCCGG TCAGCGAGCC GCCGCCGGTG TACCCGGAAT CGCACCTGAC CTTCCTGGCC 
AACGTGTACA ACGAGAAGGC CCGGGCGTTC TATCGCCGCT ACGGCGTGCA ACTGATCGAC 
GCGGCCTACG AGGCTCACGC GGAGGCCGGC GAAGTGCCGG TGATGATCAC CAAGCACTGT 
CTGCGTTTCT CCTTCAACCT GTGCCCGAAA CAGGCCAAGG GCGTCACGGG CGTGCGCACC 
AGGGTCGCGC CGATGCAACT GGTGCATCAG GACGAGGTGC TGACCCTGAC GTTCGACTGC 
AAGGCCTGCG AGATGCACGT CATCGGCAGG ATGAAAGACC ACATCCTCGC CCAGCCCCAA 
CCCGGCAGCT CGACCGGTAT CGTCGGCCAG ATCAGTCCCG AGGAGTTGCT CAAGACCATC 
AGGAACAGAG CGCAACGCTG A 

 

Protein sequence

MSLPKHHLEL LSPARDVSIA KEAILHGADA VYIGGPSFGA RHSAGNDVTD IAGLVEFAHQ 
FHARVFVTLN TILHDDELEP ARQLIWQLHD AGIDALIVQD MGILEMDIPP IELHASTQCD 
IRTLEKAKFL ADAGFSQLVL ARELGLAEVR AIGARVDSTI EFFIHGALCV AFSGQCYISH 
AQTGRSANRG DCSQACRLPY TLKDDQGRVV AYDKHLLSMK DNNQSANLRA LIDAGVRSFK 
IEGRYKDMGY VKNITAYYRQ RLDEVLSERP ELARASSGRT EHFFVPDPDK TFHRGSTDYF 
VNERRIDIGA FDSPTFTGLP VGEILKVRKK DFIAGTTEPL GNGDGLNVLV KREVVGFRAS 
VVEQLERSER GGKPHWQYRI EPNEMPAALK QLRPHHALNR NLDHDWQQAL QKTSAERRVG 
VRWQVRLTEE ALDLNVTSEE GVGASASLAG PFGLAKKPEQ ALEQLRDLLG QLGTTLYHAE 
EVEIDAPQAF FVPNSLLKAL RREAIEALTA ARLATHRRGS RKPVSEPPPV YPESHLTFLA 
NVYNEKARAF YRRYGVQLID AAYEAHAEAG EVPVMITKHC LRFSFNLCPK QAKGVTGVRT 
RVAPMQLVHQ DEVLTLTFDC KACEMHVIGR MKDHILAQPQ PGSSTGIVGQ ISPEELLKTI 
RNRAQR