Gene Avin_18250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_18250 
Symbol 
ID7760760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1808380 
End bp1809639 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content65% 
IMG OID643804724 
Producthypothetical protein 
Protein accessionYP_002799013 
Protein GI226943940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3594] Fucose 4-O-acetylase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGACA CGCCAGTGAA ACTCCAGGCA GTGAAGTTCG GCGATGGTTT TACGCGATGG 
CTACGCCGTG ACGCTCGTCC GCCGACCGCG CGGGAACTGT CGCAGGCCAT CGGGTTCGCA
CGCATCACCC TGATCGTCGG CCTGGTGTTC CTGCACTACA TGAGGTACCC GAATTCGCAG
GTTTCGCCCT TCGACGGCAT GGACGTCGCG CATCATCCGC TGGCGACCTT CGTCAACAGC
TTCGTCCTGT TCTTCTTCTT CAGCGCGGTT CCCTTGCTCA GCCTGATTTC CGGTTGGCTG
TTCTTTTCCT TCGCCGCGCG GCCGCATGCC GCCCGTTTCG AGCTGCAGCG GCGCATTCGC
CGCCGCCTGA GGTCCCTGTA CCTGCCGCTG GTGTTCTGGA ACGCCGTGTT CCTGGCGATC
CTGCTGTCCC TTTTCCTCTG GCGGGCGAGC GATCCCCTGC CTGGAGTCCT CAACATCCGC
TTCGAGCGTG CCGGCTGGTT CGACTATCTC AATGCCGTCT TCGGCCTCAC CCGGCACCCG
GTGGGGTTCC AGTTCTGGTT CGTGCGCGAC CTGTTCGTCA CTGTCCTGAT CAGTCCGCTC
CTGTGGCTGC TGCTGCGCCA TGCGCCTTAC CTGGGACTGG CGATACTGGG GCCGGCGTGG
TTGGCCGGCC ACGACCTGCT GATCTTCTTC CGCTCCGACG TGGTGTTCTT TTTCCATCTG
GGAGGTTGGT TGCGTATAGG CGGTGTGTCG CTGGAGGTGG GGCGACGTGC TGCGTTGACG
CTGGCGCTGG CCTACGTCGT TCTCGTCGCG CTGCGGGCCG CGGCGCCCCT GTTGCTAGGC
TGGGACGATC AGCGCCCCGA ATGGCTGTCG GTGGCGACGC GTGCCATGCG CCCGATCGGC
GTGCTGGCCT GCTGGGGGAT GGTCCTGCAA CTCGCGGCGA CGCCGGCGGG CGCTGCCGTC
GCACGCTACG GCGGTCTGGC CTTCTTCCTC TATGCCATGC ACTTTCCGCT GATCGCCGAG
GTGAAGATCC AACTGTGGCG CCTGGTCCCG GCTCCGACGG ACGGCTGGAT GCTGGCGCAT
TATCTGGCCA GCGTTCTGAT CACCGTGGCG ATCGCGCTTT GCGCCGGCTT GCTGTTGGCA
TACAAGGCGC CGCGTTGCTT CGCCCTGATG AACGGCGGCA GGGCGCTCGA TGCCGGGAAT
AGCCGTGCGG AGCCGGCAAC ACGGCCGGCA GCGGCCGTGT TCGAGCGGAA GCGGGATTGA
 
Protein sequence
MEDTPVKLQA VKFGDGFTRW LRRDARPPTA RELSQAIGFA RITLIVGLVF LHYMRYPNSQ 
VSPFDGMDVA HHPLATFVNS FVLFFFFSAV PLLSLISGWL FFSFAARPHA ARFELQRRIR
RRLRSLYLPL VFWNAVFLAI LLSLFLWRAS DPLPGVLNIR FERAGWFDYL NAVFGLTRHP
VGFQFWFVRD LFVTVLISPL LWLLLRHAPY LGLAILGPAW LAGHDLLIFF RSDVVFFFHL
GGWLRIGGVS LEVGRRAALT LALAYVVLVA LRAAAPLLLG WDDQRPEWLS VATRAMRPIG
VLACWGMVLQ LAATPAGAAV ARYGGLAFFL YAMHFPLIAE VKIQLWRLVP APTDGWMLAH
YLASVLITVA IALCAGLLLA YKAPRCFALM NGGRALDAGN SRAEPATRPA AAVFERKRD