| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_18220 |
|---|
| Symbol | |
|---|
| ID | 7760757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1806675 |
|---|
| End bp | 1807544 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643804721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002799010 |
|---|
| Protein GI | 226943937 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.891224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGT TTCGCGAGGA TTCGCGGCGC TGGCGCGACG CGCTACCATC CGCGGCCTTC
CTCCCGCCGG GACGCACCTT CGTCATGTCC TTTGCCTTCG AAATCGCCTT GGACCCTGTC
ACCCTCGTCG TCCTGGCGTG CGTGGCCTTC GTCGCCGGTT TCATCGACGC CATCGCCGGC
GGGGGCGGCC TGATCACGGT ACCCGCGCTG CTGACCGCCG GCCTGCCGCC GCATCTGGTG
CTGGGGACCA ACAAGCTCTG CTCCACCTTC GGTGCGGCCA TCGCCAGCCT GACCTTCATC
CGGCGTGGCC TGTTCCATCC CCGGCAGTGG TATGGCGCAC TCGCCGCCAC CGCCCTTGGC
GCACTCCTGG GCGCCGCCGT CGCCCATTAC CTGCCGGCCA GGTGGCTGAA CCAGTCGCTG
CCGGTCATCG TCTTCGCCTG CGGGCTGTAT CTGCTGTTCA GCCGTACTCC GGGCGGCATC
CAGCGGCCCG ATGCGCGGAT CGCGAAGCTA CGCCAGTGGC CGCAGGGTCT CGCCCTCGGC
GCCTACGACG GTGTGGCGGG CCCTGGTACC GGCACCTTCT GGACGGTCAG CACCCTGCTG
CTGTATCCGC TCGACCTGGT GCGCGCCAGC GGCGTGGCCC GCAGCATGAA TTTTGTCAGC
AACGCCGTGG CCTTGAGCGT CTTCATCGGC AGCGGCCAGG TGGCCTGGCT GCTCGGCCTG
AGCATGGGCT GTGCGCTGAT GACCGGCGCC TGGCTGGGCG CCCGTACCGC CATCGGCGGC
GGGGCCCGCC TCATTCGTCC GCTGTTCATC GGCGTGGTGC TGGTCCTGAC GGTGCGTCTG
GCCTGGCAAC ACTGGTTCGG GCATGGCTGA
|
|---|
| Protein sequence | MKVFREDSRR WRDALPSAAF LPPGRTFVMS FAFEIALDPV TLVVLACVAF VAGFIDAIAG
GGGLITVPAL LTAGLPPHLV LGTNKLCSTF GAAIASLTFI RRGLFHPRQW YGALAATALG
ALLGAAVAHY LPARWLNQSL PVIVFACGLY LLFSRTPGGI QRPDARIAKL RQWPQGLALG
AYDGVAGPGT GTFWTVSTLL LYPLDLVRAS GVARSMNFVS NAVALSVFIG SGQVAWLLGL
SMGCALMTGA WLGARTAIGG GARLIRPLFI GVVLVLTVRL AWQHWFGHG
|
|---|
| |