Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_18000 |
Symbol | |
ID | 7760735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1786685 |
End bp | 1790758 |
Gene Length | 4074 bp |
Protein Length | 1357 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643804699 |
Product | DEAD box and SNF-like helicase domain-containing protein |
Protein accession | YP_002798988 |
Protein GI | 226943915 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.153374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGCC CAGCCGTCCG TTCGACCCTA GCCAGCCTTC CCGATGCCTA CAAGGCGCTG CTCTATGTCC TGTTCCTGGC CAGCCCGAGG AACAAGAGCA CCCTGCTCGA ACAGCTCAAG CGCCTTGGCG TGCGCGCCAC GACCAGTCGG GCCATGGACG GCGTGGCGCT GGGCGAGATG CTGGAAACCC TGCAGCGGCT GAAGTGGCTG GAGCGCGGCG ACGAGCGCGA TTTTTTCAGG CTGAATCCGC TGGCCTGCAA CCAGGTCCTG CTGTTGTTGC AGAGCGAGCC GCAGTGGTGG CCCAAGCTGC GCGGCGGACT GGTCGAGCAT GCCGTCGCCA CGCCGGGCGG CCTGCCGGTG AGCCTGTGGC GCGGCCTCTG GCTGGCCCTG CTGGCGGGCG AGGTGCCGGA GCTGACCCAG TTGCTGCTCG GCATGGAGGC GGATCGGAGC GAACTGCCGC ACCCCTGCGG CCAACTGCTG GCCGACGAAA CCGGCCGGCA ACTGTTCGCC CGGCTCACCC CGGGCGTTCG CGAGGTGCTG CTGGAGGACT ACCTGACCCG CGCCAACGAG GGGCTGGTGG CGGCCGGGGA GACCTACCGG CAGGGGCTGG CCCTGCTCGA CAGCGACCAG GCGAAGTCCA CCGAACTGGC CTTCCAGCTA TTCCTGCAGG CGCTCTGGCG CGGCGACTGG ACGCGTTTCG AGGCACTCGG CCGGAGCGAA TGGGTGCCTT TCGGCGGAGT CTTCGAGTAT CTGCTGCGCG GAAAGCCGGG CGAGGCCCTG GAACAGATCC AGGAGTACAT CCGCATCCAG CGCGGCAGCC GCAAGCGCCG GGTCGAGCTA CCGCCCACGC TCAACGCCTG TTACTGCCTG CTCCTGCTGG TCGACGGCGA CGGCCAGCAG CATGCCGCGC TGCGCCAGGC GCTGGGGCTG GGACTGAAGA AAGGCCTCGG CACCGCCTAT CAGATGTTCG AGAAGCTCTT CGAGCAGTTC CAGGGCAAGG GCGTGCGCGG TGCCGATCCG GCCTACCGGG TTCAGCGGCT CGAGGGGTTC GACGGGCTGC TGACCGCGAT CGCCCTGTAC TGGATGGATG CGCCGGCGTC CTCCGCCTGG CAGCGCCGCC TGGCGCAGTT CCGTACCGAG CTGGAAGAGG AGGGCTATGC CTGGCTGGCG GCCGAACTGG ATGTCCTGCT CGAACGGCAG TTCGGCCTGC CCCCGGCGCA GGCGGACTGG CACCGGAGCC TGGGGCTGCG TCCGCTGGTC GACCTGTATC GCCGTCAGGA GCTGTGGGAG CACGCGCTGG CCGCGCTGGC CGCCCTGCGT CCCGGCGCCC GCAGCAGCGC TCCGCCGCAG CCGCAGAGCA GTCATCGCCT GGCCTGGATG ATCGGCAGTC CGCTCACCCC GAGCCCGGCC ATCGAGCCGC GCGAGCAGCG GCTCGGCGCC AAGGGCCAGT GGAGCAAGGG CCGGCCGGTG TCGCTCAAGC GCCTGCTCGA GGAAACCGGC AGCTTCGACT ACCTGCTGGA ACAGGACCGC CGGGCCATCC AGCAGATCCA GATGCACAGC GACGCCTTCG GCATCCGCTA CCAGCTCGAC GGCGAGCGTG CCCTGCCGCA TCTGGTCGGA CATCCGGCGT TGTTCTGGAG CGATGCGCCG GAGGTGCGCA TCGATCTGCT GGCCGGCAGC GTGGCCCTGG AGTTGCGGCA GCGCGGTGCG CAGATCCACC TGGCGCTGAG TCCCGAGGGG ATCGCGGACT GCCAGGGGCT GTTCATCGAG CGGGAAACCC CGACCCGCCT GGTGGTCTAT CCGCTCGGCC GCGAGGCCCG GCAGATCGCT GAGATCATCG GCGGCGGGCT GACCGTGCCG CAGGCGGCCA AGGCGCAACT GATGGAAACC ATCGGTAGCA TCGCGCCGCT TCTGCCGATC CACTCGGACC TGCCGGAACT GGCGGTGAAC ATCGACAAGG TAACCGCCGA CGGCAAGCTG TACGCCCACC TGCTGCCGCT GCAGGACGGT CTGCGCCTGC AATTGCTGGT GCGGCCGCTG GCCGGCGGCA GTTGGTTCCG CCCGGGGCAG GGCGCCGAGA GCGTGCTCGG CGAGCAGGAC GGCAAGCCGC TGCAGGCGGT GCGCGACCTG CAGGCCGAGC GCCGGAAGCT CAAGCAGGTG CTGCAGGCCT GCCCGGCGCT GGCCGAGGCC GACAGCGAGG GGCACGAATG GCAACTGGCC GAACCGCAGG CCGCCCTGCA GGTGTTGAGC GAACTGCAGG CGCTGGATGC CGAACTGCTC GAATGCGTCT GGCCCGAGGG CGAGCGCATG CGCATCAGGG CCCGGCCCGG CCTGCGCCAG TTGCAGTTGC GCCTGCGCCA GTGCGGCGAC TGGTTCGAGC TGGACGGCGA AGTGGTGGTC GACGACGGCC GCGTGTTGAA GCTGCGCCAG TTGCTCGAAC TGCTGCAGAG CAATCCGGGG CGCTTCGTCC GCCTCGGCGA GCAGGACTGG CTGGCCCTGG GCAGCAGCCT GCGCCGGCGC CTGGACGAAC TGGGCCGGCT GGCCGAGCGC AGTGGCGCCG AGGGCCTGCG CCTCAATTCG CTGACCGCGC CGCTGCTCGC CGAACTGGCC GAGGAGGTGG GCTGCTTCGA GGCCGACGCC GCCTGGAAGG AGCATCTGTC CCGCCTCGAA TCGCTGCGCG ATTATCGGCC GCGGGTACCC AACACCCTGC AGGCCGAGCT GCGCGACTAC CAGTTGGAGG GTTTCGACTG GATGGCGCGG CTGGCGAAAT GGGGCGTCGG CGCCTGTCTG GCCGACGACA TGGGCCTGGG CAAGACCCTG CAGACCCTGA CCCTGCTGCT GCACCGATCC GCCGAAGGGC CCCAACTGGT CGTGGCGCCG ACCTCGGTGA CGCCCAACTG GCTGGCCGAG ACCACCCGCT TCGCGCCGAC CCTGCGCCTG CACGCCTATC GCGAGAGCCG TAGCCTGGAC GGGCTGGGGC CGCGCGACCT GGTGGTGACC AGCTACGGCC TGCTGCAGCA GGACGCCGAG TCCTTCGCCG CGCAGCGCTG GACCACCGTG GTGCTGGACG AGGCGCAGGC GATCAAGAAC GCCGCCAGCA AGCGCTCCCA GGCGGCCATG GCGCTGCAGG CGGATTTCCG CCTGGTCGCC ACCGGCACAC CGCTGGAGAA CCATCTGGGC GAGCTGTGGA ACCTGTTCCG CTTCATCAAT CCCGGTCTGC TCGGCAGCCG CGAACATTTC ACCCAGCGCT TCGCCGGCCC CATCGAGCGT GGCGATCAGG GCGCGCGCAA GGCGCTCAAG GCGCTGATCC AGCCGTTCAT CCTGCGCCGC CTGAAGAGTC AGGTGCTCGA CGAACTGCCG GCGCGCACCG AGGTGGTCTA CCGGGTACCG CTCTCCGACG CCGAGCAGCA CCTCTATGAG GCCATGCGCC AGCAGGCGCT GGAGTCCATC AGCCAGAGCG GCGAGGAGGG CAGCCAGTCG CTGCGGGTGC TCACCGAAAT CACCCGGCTG CGGCGTTTCT GTTGCCATCC GAGCCTGGTC CTGCCGGACA GCGACCTGCC GGGAAGCAAG CTGGCGGCCT TCGCCGAGAT CGTCGAGGAA CTGCTCGACA GCCGGCACAA GGCGCTGGTG TTCAGCCAGT TCGTCGATCA CCTGAGCATC GTCCGCAAGT GGCTGGAGGA GCGCGGCATC CGCTACCAGT ACCTCGATGG CGCGACCCCG GCCAAGGAAC GCATGGCGCG GGTGGAAGCC TTCCAGGGCG GCGACGGCGA CATCTTCCTG ATCAGCCTCA AGGCCGGTGG CACCGGCCTC AACCTGACCG CCGCCGACTA CGTGATCCAT CTCGATCCCT GGTGGAACCC GGCGGTGGAG GACCAGGCCA GCGACCGCGC CCACCGTATG GGCCAACAGC GCCCGGTGAC CATCTACCGG CTGGTGGCGG AGAACACCAT CGAGGAGCGC ATCCTCGCCC TGCACGGGCA GAAGCGCGAT CTGGCCGACA GCCTGCTGGA GGGAGGCGAG GTCAGCGCCA AGCTCGACGC CGAGGCGCTG CTGCGCCTGC TGCGCGGCGG CTAG
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Protein sequence | MSSPAVRSTL ASLPDAYKAL LYVLFLASPR NKSTLLEQLK RLGVRATTSR AMDGVALGEM LETLQRLKWL ERGDERDFFR LNPLACNQVL LLLQSEPQWW PKLRGGLVEH AVATPGGLPV SLWRGLWLAL LAGEVPELTQ LLLGMEADRS ELPHPCGQLL ADETGRQLFA RLTPGVREVL LEDYLTRANE GLVAAGETYR QGLALLDSDQ AKSTELAFQL FLQALWRGDW TRFEALGRSE WVPFGGVFEY LLRGKPGEAL EQIQEYIRIQ RGSRKRRVEL PPTLNACYCL LLLVDGDGQQ HAALRQALGL GLKKGLGTAY QMFEKLFEQF QGKGVRGADP AYRVQRLEGF DGLLTAIALY WMDAPASSAW QRRLAQFRTE LEEEGYAWLA AELDVLLERQ FGLPPAQADW HRSLGLRPLV DLYRRQELWE HALAALAALR PGARSSAPPQ PQSSHRLAWM IGSPLTPSPA IEPREQRLGA KGQWSKGRPV SLKRLLEETG SFDYLLEQDR RAIQQIQMHS DAFGIRYQLD GERALPHLVG HPALFWSDAP EVRIDLLAGS VALELRQRGA QIHLALSPEG IADCQGLFIE RETPTRLVVY PLGREARQIA EIIGGGLTVP QAAKAQLMET IGSIAPLLPI HSDLPELAVN IDKVTADGKL YAHLLPLQDG LRLQLLVRPL AGGSWFRPGQ GAESVLGEQD GKPLQAVRDL QAERRKLKQV LQACPALAEA DSEGHEWQLA EPQAALQVLS ELQALDAELL ECVWPEGERM RIRARPGLRQ LQLRLRQCGD WFELDGEVVV DDGRVLKLRQ LLELLQSNPG RFVRLGEQDW LALGSSLRRR LDELGRLAER SGAEGLRLNS LTAPLLAELA EEVGCFEADA AWKEHLSRLE SLRDYRPRVP NTLQAELRDY QLEGFDWMAR LAKWGVGACL ADDMGLGKTL QTLTLLLHRS AEGPQLVVAP TSVTPNWLAE TTRFAPTLRL HAYRESRSLD GLGPRDLVVT SYGLLQQDAE SFAAQRWTTV VLDEAQAIKN AASKRSQAAM ALQADFRLVA TGTPLENHLG ELWNLFRFIN PGLLGSREHF TQRFAGPIER GDQGARKALK ALIQPFILRR LKSQVLDELP ARTEVVYRVP LSDAEQHLYE AMRQQALESI SQSGEEGSQS LRVLTEITRL RRFCCHPSLV LPDSDLPGSK LAAFAEIVEE LLDSRHKALV FSQFVDHLSI VRKWLEERGI RYQYLDGATP AKERMARVEA FQGGDGDIFL ISLKAGGTGL NLTAADYVIH LDPWWNPAVE DQASDRAHRM GQQRPVTIYR LVAENTIEER ILALHGQKRD LADSLLEGGE VSAKLDAEAL LRLLRGG
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