| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17830 |
|---|
| Symbol | |
|---|
| ID | 7760718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1768250 |
|---|
| End bp | 1768732 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643804682 |
|---|
| Product | phosphoglycerate mutase family protein |
|---|
| Protein accession | YP_002798971 |
|---|
| Protein GI | 226943898 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGTTTCTTAT TCGTCACGCG AAATCGCCCA AGGAAGGCGC GGCCTTTTCC
GACCGCGACC GACCCCTGGC GGAGCGTGGC AGGCGCGATC TGGAAAAAAT GGGCAGGCGG
CTGGCGAAGC GCTCGATAAA ACCCGATCTG ATCCTGTCGA GTCCGGCACT GCGCACGCTG
GCGACGGCGG AAGGCATCGC CAGGCTTCTC GATTACAGCC TGAAGGACAT CGAGACGGAC
GATCGGCTGT ATGCCTGTCA GGCGGACGAG TTGCTCGACA TCATCCGAAC CCAGGACGAC
AAGCTGAAGA GCGTGCTGCT GGTCGGTCAT AATCCCCAGT TGGCCGAGCT GGCCAGGCGT
CTCTCGGGCA AGATCGGCCG CCTGCCGACC TGTTCCGTCG TCGAGTTCAA GTTCGATGCC
GAATCCTGGT CGAGCGTCGG GGAGTTCAAG CCGGCGAAAG TCAAGCTCGA CCGTCCTAAG
TAA
|
|---|
| Protein sequence | MKKLFLIRHA KSPKEGAAFS DRDRPLAERG RRDLEKMGRR LAKRSIKPDL ILSSPALRTL
ATAEGIARLL DYSLKDIETD DRLYACQADE LLDIIRTQDD KLKSVLLVGH NPQLAELARR
LSGKIGRLPT CSVVEFKFDA ESWSSVGEFK PAKVKLDRPK
|
|---|
| |