Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_17740 |
Symbol | |
ID | 7760709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1760640 |
End bp | 1761878 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643804673 |
Product | MFS transporter |
Protein accession | YP_002798962 |
Protein GI | 226943889 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCAAT CGCAACACTC GCCCGGCGCC GTATCGGACT CCCGGCAGCC CGCCAGCACG ACCGTTGCCG AGCGACTTCC CCTGTCCGCC CTGCTGGCCC TGGCCATGAC CGGCTTCATC GCCATCCTCA CCGAAACCCT CCCGGCCGGA CTCTTGCCGC AGCTCGGCCG GGGACTCGAC ATTTCGCAGG CGCTGGCCGG CCAGTTGGTC AGCGCCTACG CGCTCGGCTC GCTGGTTGCG GCGATTCCCC TGATCACCCT GACCGCCGGC TGGCGACGAA AGCCGCTGCT CCTGCTCGCC ATCGGCGGTT TCCTGCTGTT CAACAGCATC ACCGCGCTGT CGTCCAGCTA CCCGCTCACA CTGCTCGCCC GCTTCCTGGC GGGCGTCGCC GCCGGCCTGG CCTGGGGCCT GCTGGCCGGT CATGCGCGCC GCATGGTGGC CGCCCCACTG CAAGGGCGCG CCATGGCCAT CGCGATGGTG GGCACGCCGC TCGCCCTTTC GCTGGGCGTA CCGGCGGGAA CCTGGCTTGG CGCCCTGGTC GGCTGGCGGA TGGCCTTCGG TCTGATGTCC GGGCTGACCC TGATCCTGGC GGTCTGGGTA CTGCGCAAGG TACCGGATTT CCCCGGGCGG GCGGCCGAGC GGCGCCTGGG CATACGCCAG GTCTTCGCGA TCCCCGGCGT ACGCCCGGTC CTGCTGGTGA TCCTGCTCTG GGTGCTGGCG CACAACATCC TCTACACCTA CATCGCGCCC TTCCTGGCGC CGGCCGGCAT GAGCACCAGC GTGGACCGGA TTCTGCTGGT GTTCGGAGCC TCGGCCCTGC TGGGCATCTG GATCGTCGGC CTGCTGATCG ACCGCTGGCT GCGTGCCCTG GTGCTGCTCA GCCTCGGCGG ATTCGCCCTG GCATCGCTGG CGCTGGGCTT TGGCGGTACG CAGCCGGCCG TGGTCCACGC CGGCGTGGCG GTATGGGGCC TCATCTTCGG CGGTGCGGCG ACACTGCTGC AGACGGCTTC GGCGGATGCC GCCGGCGAGG GCGCCGACCT GGCCCAATCG ATGATCGTCA CGGTCTGGAA TCTCGCCATC GCCGGCGGCG GCGTGTTCGG CGGTCTGCTG CTGGAAACCG CCGGCGTGGG CGCTTTCCCC TGGGTGCTGC TGGGGCTGCT CGCGGCCGCC CTGCTTTGCG CCGGGATGGC CAGGACCCAC GGCTTCAGGG CAGAACCGCG ACAGGTGCGG GCGGACTGA
|
Protein sequence | MNQSQHSPGA VSDSRQPAST TVAERLPLSA LLALAMTGFI AILTETLPAG LLPQLGRGLD ISQALAGQLV SAYALGSLVA AIPLITLTAG WRRKPLLLLA IGGFLLFNSI TALSSSYPLT LLARFLAGVA AGLAWGLLAG HARRMVAAPL QGRAMAIAMV GTPLALSLGV PAGTWLGALV GWRMAFGLMS GLTLILAVWV LRKVPDFPGR AAERRLGIRQ VFAIPGVRPV LLVILLWVLA HNILYTYIAP FLAPAGMSTS VDRILLVFGA SALLGIWIVG LLIDRWLRAL VLLSLGGFAL ASLALGFGGT QPAVVHAGVA VWGLIFGGAA TLLQTASADA AGEGADLAQS MIVTVWNLAI AGGGVFGGLL LETAGVGAFP WVLLGLLAAA LLCAGMARTH GFRAEPRQVR AD
|
| |