Gene Avin_17740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17740 
Symbol 
ID7760709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1760640 
End bp1761878 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content71% 
IMG OID643804673 
ProductMFS transporter 
Protein accessionYP_002798962 
Protein GI226943889 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAT CGCAACACTC GCCCGGCGCC GTATCGGACT CCCGGCAGCC CGCCAGCACG 
ACCGTTGCCG AGCGACTTCC CCTGTCCGCC CTGCTGGCCC TGGCCATGAC CGGCTTCATC
GCCATCCTCA CCGAAACCCT CCCGGCCGGA CTCTTGCCGC AGCTCGGCCG GGGACTCGAC
ATTTCGCAGG CGCTGGCCGG CCAGTTGGTC AGCGCCTACG CGCTCGGCTC GCTGGTTGCG
GCGATTCCCC TGATCACCCT GACCGCCGGC TGGCGACGAA AGCCGCTGCT CCTGCTCGCC
ATCGGCGGTT TCCTGCTGTT CAACAGCATC ACCGCGCTGT CGTCCAGCTA CCCGCTCACA
CTGCTCGCCC GCTTCCTGGC GGGCGTCGCC GCCGGCCTGG CCTGGGGCCT GCTGGCCGGT
CATGCGCGCC GCATGGTGGC CGCCCCACTG CAAGGGCGCG CCATGGCCAT CGCGATGGTG
GGCACGCCGC TCGCCCTTTC GCTGGGCGTA CCGGCGGGAA CCTGGCTTGG CGCCCTGGTC
GGCTGGCGGA TGGCCTTCGG TCTGATGTCC GGGCTGACCC TGATCCTGGC GGTCTGGGTA
CTGCGCAAGG TACCGGATTT CCCCGGGCGG GCGGCCGAGC GGCGCCTGGG CATACGCCAG
GTCTTCGCGA TCCCCGGCGT ACGCCCGGTC CTGCTGGTGA TCCTGCTCTG GGTGCTGGCG
CACAACATCC TCTACACCTA CATCGCGCCC TTCCTGGCGC CGGCCGGCAT GAGCACCAGC
GTGGACCGGA TTCTGCTGGT GTTCGGAGCC TCGGCCCTGC TGGGCATCTG GATCGTCGGC
CTGCTGATCG ACCGCTGGCT GCGTGCCCTG GTGCTGCTCA GCCTCGGCGG ATTCGCCCTG
GCATCGCTGG CGCTGGGCTT TGGCGGTACG CAGCCGGCCG TGGTCCACGC CGGCGTGGCG
GTATGGGGCC TCATCTTCGG CGGTGCGGCG ACACTGCTGC AGACGGCTTC GGCGGATGCC
GCCGGCGAGG GCGCCGACCT GGCCCAATCG ATGATCGTCA CGGTCTGGAA TCTCGCCATC
GCCGGCGGCG GCGTGTTCGG CGGTCTGCTG CTGGAAACCG CCGGCGTGGG CGCTTTCCCC
TGGGTGCTGC TGGGGCTGCT CGCGGCCGCC CTGCTTTGCG CCGGGATGGC CAGGACCCAC
GGCTTCAGGG CAGAACCGCG ACAGGTGCGG GCGGACTGA
 
Protein sequence
MNQSQHSPGA VSDSRQPAST TVAERLPLSA LLALAMTGFI AILTETLPAG LLPQLGRGLD 
ISQALAGQLV SAYALGSLVA AIPLITLTAG WRRKPLLLLA IGGFLLFNSI TALSSSYPLT
LLARFLAGVA AGLAWGLLAG HARRMVAAPL QGRAMAIAMV GTPLALSLGV PAGTWLGALV
GWRMAFGLMS GLTLILAVWV LRKVPDFPGR AAERRLGIRQ VFAIPGVRPV LLVILLWVLA
HNILYTYIAP FLAPAGMSTS VDRILLVFGA SALLGIWIVG LLIDRWLRAL VLLSLGGFAL
ASLALGFGGT QPAVVHAGVA VWGLIFGGAA TLLQTASADA AGEGADLAQS MIVTVWNLAI
AGGGVFGGLL LETAGVGAFP WVLLGLLAAA LLCAGMARTH GFRAEPRQVR AD