Gene Avin_17700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17700 
Symbol 
ID7760705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1757726 
End bp1758697 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID643804669 
Productanti-sigma factor, FecR family 
Protein accessionYP_002798958 
Protein GI226943885 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCTC CCCGACTGGA TGCGCCGACC CAAAGCGCCG TGGACTGGAC GCTGCGGCTC 
GATCCCGAGC GCGCGACCTC CGAGGATCGG CAGGCCTTCG CCGCCTGGCT GGCCGCCGAT
TCCCGCCATG TCGCCGCCTG GCAACGGGTC AACGGTTTGC TGCAACAGCC ATTGGCCGAC
CTGCAACGGG CCGAGGTCCG CAGTCCCGGT CAACTGGACG CGGCCAAGCG AGCCCTGGAT
ACGCCAGCCT CGGCCCAGCG CCGCCGCCTG CTGGGAGGGC TGTCGCTGCT GGCCCTCGGG
CTGTCCGGCA CAGCCGCCGT CGACCGGCTG GCGCCGCTGC ACGGCCTGCT GGCCGATCAC
CACACCAGTA CGGCGCAGCG CAAGAGCGTC ACCCTCGCCG ACGGCACGCA GCTGATCCTC
AATGCGCGTA CCGCGCTGGA CGTGCATTTC AACGATGCCC GCCGGCGCAT CCACCTGCAT
GAAGGCGAGC TGCTGGCACA AGTCGCCGCG GACCCGTTGC GCCCCTTCGT GATCGTCACC
GCGCAGGGAC AGGTGAAAGC CTCGGAGACT CGACTGCTGG TTCGCCAGGA GGCCGGGCGC
AGCCTGGTCA GCGTGCTGCG GCAGGATGCC TGGTTGCAGC AGCGGGACGG CAGCGAAACC
CTTCTGCACC CCGGCCAAGC GGCCTGGTTC GACGAACGGG GCATGCGACC GGCCGATGCC
AGCCTGCTGA CCCGCGCCAC CTGGAGCCAG GGTTACCTGG AAAGCCGCGA CGAACCGCTC
GGCCGGCTGA TCGAGGCCAT GCGCCCCTAC TATCCGGGAT TGCTGCGGAT CAGCCCGGCT
GCCGCCGAGA TCCGCACCTT CGGCATTTTC CAGGTGGACG ACATCCAGCA GGCCCTGCGC
TCGCTGGCGG AAACCCTGCC GGTGCGGGTA ACCAGCTATG GCCCGCTGCT GACAACGATC
GACCGGGCCT GA
 
Protein sequence
MKPPRLDAPT QSAVDWTLRL DPERATSEDR QAFAAWLAAD SRHVAAWQRV NGLLQQPLAD 
LQRAEVRSPG QLDAAKRALD TPASAQRRRL LGGLSLLALG LSGTAAVDRL APLHGLLADH
HTSTAQRKSV TLADGTQLIL NARTALDVHF NDARRRIHLH EGELLAQVAA DPLRPFVIVT
AQGQVKASET RLLVRQEAGR SLVSVLRQDA WLQQRDGSET LLHPGQAAWF DERGMRPADA
SLLTRATWSQ GYLESRDEPL GRLIEAMRPY YPGLLRISPA AAEIRTFGIF QVDDIQQALR
SLAETLPVRV TSYGPLLTTI DRA