Gene Avin_17610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17610 
Symbol 
ID7760696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1744870 
End bp1746270 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content71% 
IMG OID643804660 
Productsigma54-dependent activator protein 
Protein accessionYP_002798949 
Protein GI226943876 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCCA TCGACCGCCT CAAGGACTAT CACAGCACCC GCCTGCAGGC GATGCGCTCG 
CTGTTCGAGA TCGTCGAGCA GTCGAGCGAG GGCACGGTGA TCGTCGACCG CGACGCGCGC
ATCGTCTGGA TCAACGAACG CTACGCCCGG CGCTTCGGCC TCGCCGATCC GGCCGAGGCC
CTCGGCCAGC CGGTGGAGCG TGTGATCCCC GGCAGCCTGC TGCGCGAGGT GGCGCACAGC
GGCCAGCCGA TCCTGCTGGA CATGCTGGAC ACCCCGAAGG ACCCGCTGGT GGTGATGCGC
CTGCCGGTCC GCGACGAGGA CGGACGCTCG ATCGGCGCCA TCGGCTTCGC CCTGTTCGAC
GAACTCAAGC GCCTCTCGCC GCTGGTCCGC CACTACCTGA GCCTGCAGGA GGAACTGGCC
TCGGCCCGCT CCCTACTGCA GGCGCGCCAG GCCCGCTACA GCTTCGCCCA GTACATCGGC
ACCAGCGCCG CGGTCCTGGA GGTCAAGCGC CGCGCCCGTC GCGGCGCGGC CAGCGAGGCG
CCGGTGCTGC TGCTCGGCGA GACCGGCACC GGCAAGGAAC TGCTGGCCCA CGCCATCCAC
GCCGCCTCGC CGCGCGCCCA CCGGCCCTTC GTCAGCCTGA ACATGGCGGC CATCCCGGAA
AACCTGCTGG AGGCGGAGTT CTTCGGCACC GCGCCGGGCG CCTTCACCGG CGCCAGCCGC
AAGGCGCGGC CCGGCAAGTT CCAGATCGCC CAGGGCGGCA CCCTGTTCCT CGACGAGATC
GGCGACATGC CCCTGCACCT GCAGGGCAAG CTGCTGCGCG TGCTGCAGGA GAAGGAATTC
GAGCCGGTCG GCTCCAACGA GATCCTGTTC AGCGACGTGC GCCTGATCAC CGCCACCTCC
TGCGACCTGG AAGAGGCGGT GCGCCAGGGC AAATTCCGCG CCGACCTCTA CTACCGGCTG
AACGTGCTGC CGATCCACCT GCCGCCGTTG CGCGAGCGCC CCGAAGACCT GCCGGCGCTG
TGCGAGGCCA TCCTCGGCCA GCTCGGCAGC GACCATACGC TCAGTCCCGC CGCCCTCGCC
CTGCTCGCCC GCCACGACTG GCCGGGCAAC ATCCGCGAAC TGCGCAACCT GCTGGAGCGC
GCCATCCTGC TCGGCGACGA CCCATACCTG GACGAGGCCA TGCTCGCCGC CGCCCTGGGA
CCGCTGCCGC CCCCCGCGCC GGCCGCGGTA GCGGCCGTCA CCGGCGAGAA CTACCGGCAG
GCCATGCAGC GCTTCGAGCG CGAACTGCTG GAAAACGCCC TGGCGAGCGC CGGCAATGCC
CTGGAGGCCG CGCGACGCCT GGGCCTGAGC CGCTCCACCC TGTACCGCCG GCTGGCCGCC
CTGGGTATCT CGTCCCGTTA A
 
Protein sequence
MNSIDRLKDY HSTRLQAMRS LFEIVEQSSE GTVIVDRDAR IVWINERYAR RFGLADPAEA 
LGQPVERVIP GSLLREVAHS GQPILLDMLD TPKDPLVVMR LPVRDEDGRS IGAIGFALFD
ELKRLSPLVR HYLSLQEELA SARSLLQARQ ARYSFAQYIG TSAAVLEVKR RARRGAASEA
PVLLLGETGT GKELLAHAIH AASPRAHRPF VSLNMAAIPE NLLEAEFFGT APGAFTGASR
KARPGKFQIA QGGTLFLDEI GDMPLHLQGK LLRVLQEKEF EPVGSNEILF SDVRLITATS
CDLEEAVRQG KFRADLYYRL NVLPIHLPPL RERPEDLPAL CEAILGQLGS DHTLSPAALA
LLARHDWPGN IRELRNLLER AILLGDDPYL DEAMLAAALG PLPPPAPAAV AAVTGENYRQ
AMQRFERELL ENALASAGNA LEAARRLGLS RSTLYRRLAA LGISSR