Gene Avin_17590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17590 
Symbol 
ID7760694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1742407 
End bp1743180 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID643804658 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002798947 
Protein GI226943874 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCC TCAGCGGCAA GACCGCCCTG GTCACCGGCT CCACCAGCGG CATCGGCCTC 
GGCATCGCCC ACTGCCTGGC CGCCGCCGGC GCCAACCTGG TGCTCAACGG CTTCGGCGAC
GCGCAGCAGG CGCTGGAGGC GGTACGCCAG CACGGCCACG AAGCGCGCCA CCATCCGGCG
GACATGTCCA AGCCGGAGGA AATCGCCGCG CTGATGGCCT TCGCCGAGAG CGAGTTCGGC
GCCGTCGACA TCCTGGTCAA CAACGCCGGC ATCCAGCACG TGGCGCCGGT CGAGGAATTC
CCGCCGGAGC GCTGGGACAG CATCCTCGCC ATCAACCTCT CCTCGGCCTT CCACACCACC
CGCCTGGCCC TGCCGGGCAT GCGCCGGCGC GACTGGGGGC GGATCGTCAA CATCGCCTCG
GTGCACGGCC TGGTCGCCTC GGCGCAGAAG TCCGCCTACG TCGCCGCCAA GCACGGGCTG
CTCGGCCTGA CCAAGGTGGT CGCCCTGGAA ACCGCGCAGA CCCCCATCAC CTGCAACGCG
ATCTGTCCGG GCTGGGTGCT GACGCCGCTG GTGCAGCAGC AGATCGACGC CCGCGTCCAG
GCCGGCGGCG ATCCCGCCGC CGCCCGTCAC GACCTGCTGG CCGAGAAACA GCCGTCGCTG
GAATTCGTCA CCCCCGAGCA GCTCGGCGCG CTGGTGCTGT TCCTGTGCAG CGACGCGGCC
AGCCAGGTGC GCGGCGCGGC CTGGAACATG GATGGCGGCT GGGCGGCGCA ATGA
 
Protein sequence
MTILSGKTAL VTGSTSGIGL GIAHCLAAAG ANLVLNGFGD AQQALEAVRQ HGHEARHHPA 
DMSKPEEIAA LMAFAESEFG AVDILVNNAG IQHVAPVEEF PPERWDSILA INLSSAFHTT
RLALPGMRRR DWGRIVNIAS VHGLVASAQK SAYVAAKHGL LGLTKVVALE TAQTPITCNA
ICPGWVLTPL VQQQIDARVQ AGGDPAAARH DLLAEKQPSL EFVTPEQLGA LVLFLCSDAA
SQVRGAAWNM DGGWAAQ