| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17570 |
|---|
| Symbol | |
|---|
| ID | 7760692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1741567 |
|---|
| End bp | 1742265 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643804656 |
|---|
| Product | 3-oxoacid CoA-transferase, subunit A |
|---|
| Protein accession | YP_002798945 |
|---|
| Protein GI | 226943872 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC TCTATCCCAG CGCCCAGACC GCCCTCGACG GGCTGGTGGA GGACGGCATG
ACCCTCGCCG TCGGCGGCTT CGGCCTGTGC GGCATCCCCG AGGCGCTGAT CGCCGCCCTG
CGCGACTCCG CCAAGGGAGG CCTCACCGTC ATCAGCAACA ACGCCGGCGT CGACGACTTC
GGCCTCGGCC TGCTCCTCGC CACCCGGCAG ATCCGCAAGA TGATTTCCTC CTACGTCGGC
GAGAACAAGG AATTCGAACG CCAGTACCTG GCCGGCGAAC TGGAGCTGGA ATTCACCCCT
CAGGGCACCC TGGCCGAGAA GCTGCGCGCC GGCGGCGCCG GCATACCCGC CTTCTACACC
CGGACCGGCT ACGGCACCCT GGTCGCCGAG GGCAAGGAGA CCCGCCAGTT CGACGGCGAA
TGGTACGTGC TGGAGAAGTC GCTGACCGCC GACATCGCCC TGGTCAAGGC CTGGAAGGCC
GACAAGGCCG GCAACCTGCT GTTCAGGAAG ACCGCGCGCA ACTTCAACCC GCTGGCGGCG
ATGGCCGGAC GGGTCTGCGT GGCCGAGGTC GAGGAAGTCG TCGAGACCGG CGAACTGGAC
CCGGACCGGA TCCACCTGCC GGGCATCTAC GTGCAACGCA TCGTGCTCAA CCCCAACCCG
GAAAAACGCA TCGAACAACG TACCCTGCGG AGTGCCTGA
|
|---|
| Protein sequence | MNKLYPSAQT ALDGLVEDGM TLAVGGFGLC GIPEALIAAL RDSAKGGLTV ISNNAGVDDF
GLGLLLATRQ IRKMISSYVG ENKEFERQYL AGELELEFTP QGTLAEKLRA GGAGIPAFYT
RTGYGTLVAE GKETRQFDGE WYVLEKSLTA DIALVKAWKA DKAGNLLFRK TARNFNPLAA
MAGRVCVAEV EEVVETGELD PDRIHLPGIY VQRIVLNPNP EKRIEQRTLR SA
|
|---|
| |