Gene Avin_17390 details

Gene Information

• Locus tag: Avin_17390
• ID: 7760674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1725704
• End bp: 1726126
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643804638
• Product: Phenylacetic acid degradation-related protein
• Protein accession: YP_002798927
• Protein GI: 226943854
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00857022
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAACC GCGCACAGAC CTGGTTCGAC GCGCTATTGG CCGGCCGGCA ACGCTGGCCG 
GTCTACGACC TGCTGCAGGG CGAACTGGTC GCCTGGGAGG CGGGAACCCT GGTGTGCCGC 
TATGTCGCCA GCGAGGCGTT CGCCAATCCG ACGGGGCATG TCCAGGGCGG AATGCTCGCG 
GCCATGCTGG ACGACGCGAT GGGAACCCTC GCGCAATCGC CCCTGGCCGC GGGGCAGTTC 
GCCTCGACCC TGTCTCTCAC GGTGTCCTTC CTGCGTCCGG CCCGGCCGGG TCCGGTGCGG 
GTCGAGGCGC GCTTCGTGCG CCAGGGCAGC CGGATACTCA ATGTCGAAGG CCAGGCGCTC 
CAGGACGACA AGCCGGTCGC CCAGGCCGTC GCCGTCTCCC TGGTCGGCCA GGCGGGCGGC 
TGA 

 

Protein sequence

MENRAQTWFD ALLAGRQRWP VYDLLQGELV AWEAGTLVCR YVASEAFANP TGHVQGGMLA 
AMLDDAMGTL AQSPLAAGQF ASTLSLTVSF LRPARPGPVR VEARFVRQGS RILNVEGQAL 
QDDKPVAQAV AVSLVGQAGG