| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17340 |
|---|
| Symbol | |
|---|
| ID | 7760669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1717712 |
|---|
| End bp | 1718782 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643804633 |
|---|
| Product | intracellular sensory histidine protein kinase, two component |
|---|
| Protein accession | YP_002798922 |
|---|
| Protein GI | 226943849 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACA ATAAAGAACC GGCCCCGACA AACAACGAAA CAGACTCCAT CCGACCACCC
TACCAGGCGT TGATCGAACA GTCGCTGGTT GGCATCTATA TATTGCAGGA CAACAGGCTC
AAATATTCGA ACAACGCCTT CGCGCAATTG AATGGCTATA AAATCGAAGA CTTCGTAGGT
CGCAGCCTGC ATGACTTCCT CGACAGGAAC CATCTGATGC AGGTCATGCG GAATATTCAC
ACGCGCATCG CCCAGGGCGG CAGCATGCGC TACAAGGTCT GCGCCCGCAA AAGCGACGGG
CAACCCATTT ATCTGGAAGT TCACGGCAGC TATACCGAAC TGGAGGGCCG CCCGGCAGTG
GCCGGGGTCG CCATCGACAT CACCGACCGC CACAACTACG AACAGGAACT CAGGAATTCA
CGCGAACAAC TGCGCATTCT CGCCCGCCAC AGCAACAAAC TCGCCGAACA ACTCAGGGCC
AGGATAGCCC GTGAAATACA TGACGTCCTG GGCGGAGTGC TGACATCGAT AAAGCTGGAC
ACCAACCGTC TGAAACAACG CGCCGACAAT CCGGAAACAC TGGAAATCAT CGAAAGCATA
CTCGGCCTCA GCCAGGAAGG CATCGATATG GTGCGGGAAA TATCGGAGCA ACTTTATCCC
GCGGTCCTGG ATCATTTGGG CCTCGATGCG GCACTTCGAA ACGATTTCGA GCGATTCTGC
AGGCGAACCG GCCTGAACGG CGATTTCCAT ACGAGCTGCA CCGCCCTGAA TCTCGGCGGC
AGCAAATCCC TGGCCGTCTA TCGAATATTT CAAGAAGCGC TCACCAATAT AGCCAAACAT
GCCCAGGCGG AAATCGTGAC TGTCGATGTC GGCCTCGACC GACAACTATT CCATATGGAA
ATAAAAGACG ACGGCCAGGG CTTGCACGCC AATTTTCCCC GCGAAGGCTC CCTGGGACTG
CTCAGCATGA AAGAGCGTGC GGCCGAAGTC GGCGGCATGC TGGAAATCAG CGGCACGGCA
CGGGGCACTC GACTGCATTT GCAGATTCCG CTTCAGGAAG ACAAGGCATG A
|
|---|
| Protein sequence | MDNNKEPAPT NNETDSIRPP YQALIEQSLV GIYILQDNRL KYSNNAFAQL NGYKIEDFVG
RSLHDFLDRN HLMQVMRNIH TRIAQGGSMR YKVCARKSDG QPIYLEVHGS YTELEGRPAV
AGVAIDITDR HNYEQELRNS REQLRILARH SNKLAEQLRA RIAREIHDVL GGVLTSIKLD
TNRLKQRADN PETLEIIESI LGLSQEGIDM VREISEQLYP AVLDHLGLDA ALRNDFERFC
RRTGLNGDFH TSCTALNLGG SKSLAVYRIF QEALTNIAKH AQAEIVTVDV GLDRQLFHME
IKDDGQGLHA NFPREGSLGL LSMKERAAEV GGMLEISGTA RGTRLHLQIP LQEDKA
|
|---|
| |