Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_17320 |
Symbol | |
ID | 7760667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1715867 |
End bp | 1717075 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643804631 |
Product | outer membrane porin |
Protein accession | YP_002798920 |
Protein GI | 226943847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCCA GCGGGGACTT CCTGGCCGAT AGCAAGGCTA CCCTGACATT GCGGAATTTC TATATGGATC GCGACTACAA GGGCGACGCC ACGCGTTTTC AGTCGCAGTC GCGTCAGGCG GAATGGGCAC AGGGTTTCAT ATTGAATGTT CAATCCGGTT ATACCGAAGG ACCTGTCGGC TTCGCCGTCG GCCTGACGAG CAAGACCGGC GTCAAGCTCG ATTCCTCCCC CGATCGCGTG GGCACCGGCT TGCTCGCATA TGGGCCGGAT GGCAAGGCGG AGAGCAGTTA CAGCCAGTTC GATTTCGTCC TCAAGGCGCG CGCCGCGCAG ACCGAACTGG CCGTCGGCGG TCTGACGCCC ATGGTGCCGA TACTGGTTTC GCCGACGGTG CGCCTGTTTC CGCCGGTGTT TCGCGGCGCG CAGATGAAGT CGGGGGAATT TCGCGATCTC ACCCTGCACG CGGGCTATTT CGATCGCATC GAGGAGCGCA ACTCCACCAA CTTCGAGGCA TTGCGGATAG CCAGCCCCTG GGGGCGTTTC GAGTCCAGCG CCGAGGGCAG TCACTTCGCT TTCGTCGGCG CCGATTACCG TTGGACTCCC GGGCTGGTCA CGAACCATTA CTTCGGCTAT CTCGACGATG TGTACAAGCA GCATTACCTG GGCGTGCAGT TCAGCCATGC CCTGGGGCCC GGCAAGTTGC AGCATGATTT TCGCTATTTC TCCAGCAGCG AGCAGGGCGA GGCGCGGGCC GGGGATATCG ACAATCGCTA TGCGGGATTT TTCTCGACCT ACAAGTACAA GGGGCATGCG TTCGGCGCCG GTTACTACCG GATTTTCGGC GAACACGGGT TCGTCGGCAT AAACGCGACC TTCACGCACA CGCACAGCCA GGGACTACTC GACGGCGAGA TGGGCAACCC GGACGAGCGG GTATGGCAGG TGCGTTACGA TTACGACTTT GCGGCAAGCG GGTTGCCCGG CCTGCTGGCT ACGTTTCGCT ATGCCGATGG CAGTCACATA AACATGCCCG CCTTCAGTGC CAGCAGGGCG CACGAAAGCG AGCGATATCT GGAGCTGTCC TATGTGATCC AGTCGGGGCC GCTGAAGGAT ATGGCGTTTC GCGTTCGCCA GGCCGATTAC CAGAGTAGTT ATTCCCGCGA TGTGAACGAG TTGCGGATAA ACATGGACTA CACCATCGCC ATCTGGTGA
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Protein sequence | MPASGDFLAD SKATLTLRNF YMDRDYKGDA TRFQSQSRQA EWAQGFILNV QSGYTEGPVG FAVGLTSKTG VKLDSSPDRV GTGLLAYGPD GKAESSYSQF DFVLKARAAQ TELAVGGLTP MVPILVSPTV RLFPPVFRGA QMKSGEFRDL TLHAGYFDRI EERNSTNFEA LRIASPWGRF ESSAEGSHFA FVGADYRWTP GLVTNHYFGY LDDVYKQHYL GVQFSHALGP GKLQHDFRYF SSSEQGEARA GDIDNRYAGF FSTYKYKGHA FGAGYYRIFG EHGFVGINAT FTHTHSQGLL DGEMGNPDER VWQVRYDYDF AASGLPGLLA TFRYADGSHI NMPAFSASRA HESERYLELS YVIQSGPLKD MAFRVRQADY QSSYSRDVNE LRINMDYTIA IW
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