Gene Avin_17260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17260 
Symbol 
ID7760661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1708222 
End bp1708623 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID643804625 
Producthypothetical protein 
Protein accessionYP_002798914 
Protein GI226943841 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC TCCTGAAACA GGCCGCCGAA CACTGGCGCT ACGTCGCTCC GCTGCTCACC 
CCGCCGCAGA CCGAGGCCGA CTACGACGCC CTGGTCGAAG CCCTCGACGA GTTGCTCGAC
GAGATCGGCG GTACCGAGCA GCACCCCCTT GCCGCCCTGG CCTCGCAGGT CGGCGATCTC
ATCGCTGCCT ACGATGCGGA GCATTACCCT ATTCCCGACG CCCCGGGGCA TGAGGTACTG
CGCTACCTGA TGAACGAGCA CGGCCTGAAC CAGAGCGACC TGCCGGAAAT CGGCGCCCAG
TCTGTGGTGT CGGAGATCCT CAACGGCAAG CGTCAGCTCA ATGTTCGGCA CATCCGTGCA
TTGGCCGAGC GATTCAAGGT GCCGGCGGAC GTGTTCCTGT AG
 
Protein sequence
MSKLLKQAAE HWRYVAPLLT PPQTEADYDA LVEALDELLD EIGGTEQHPL AALASQVGDL 
IAAYDAEHYP IPDAPGHEVL RYLMNEHGLN QSDLPEIGAQ SVVSEILNGK RQLNVRHIRA
LAERFKVPAD VFL