Gene Avin_17210 details

Gene Information

• Locus tag: Avin_17210
• ID: 7760656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1705733
• End bp: 1706386
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643804620
• Product: CRISPR-associated protein, CT1976
• Protein accession: YP_002798909
• Protein GI: 226943836
• TIGRFAM ID: [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCACCT TGCTGCTGTG CCTGCAGGGA CCGATGCAAT CCTGGGGCAC GACCAGCCGC 
TTCGACGAGC GCGACACCCA GCTCGAACCC TCCAAGTCCG GCGTGCTCGG CCTGGTCTGC 
GCCGCGCTCG GACGCGATCG CCGCGAGCCG CTGGAGGATC TGGCGGCCCT GCGCATGGGC 
GTGCGGGTGG ACCGCGAGGG TGTCCCGCTG CGCGATTACC AGACCGCCAC CGGCGTGCTG 
ATCGCCAGCG GCAAGGCGGA CCCCAGGCGT ACCGTGGTCA GCCCGCGCTT CTATCTGTCC 
GATGCGGTTT TTCTGGTGGG GCTGGAGAGC GCCGACAGCG CCTTGCTGGA GCGTATCCAG 
GGCGCCCTGC GCAGGCCGGT CTGGCCGCTG GCGCTGGGGC GCAAGAGCTT CGTGCCGGGC 
ATGCCGGTGT TCCTGGCGGA CGGTCTTCTA CACGCCGATC TGCTGTCGGC CCTGAGCGGT 
TATCCGCCGC TGGTGCCCTG GGCGCCGGGC GGCAGCGTGC GCCTGGCGCT GGAGGACCTG 
CGGGAGGGCT CGGTGCGTCT CGACCAGCCG GTCGGCCCCT TCGCCGAGCG GCGTTTCGGG 
CCGCGTTTCG TCAAACAGGA AGTGCTGCAT GTACCTGACC CGATTGACCC TTGA 

 

Protein sequence

MATLLLCLQG PMQSWGTTSR FDERDTQLEP SKSGVLGLVC AALGRDRREP LEDLAALRMG 
VRVDREGVPL RDYQTATGVL IASGKADPRR TVVSPRFYLS DAVFLVGLES ADSALLERIQ 
GALRRPVWPL ALGRKSFVPG MPVFLADGLL HADLLSALSG YPPLVPWAPG GSVRLALEDL 
REGSVRLDQP VGPFAERRFG PRFVKQEVLH VPDPIDP