Gene Avin_16600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_16600 
Symbol 
ID7760594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1642278 
End bp1643183 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID643804558 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002798848 
Protein GI226943775 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA GGCAATTCGG CGAGAGGACT TCGGACTTCG AAGTGATCCT CAACGAGCCC 
CAGCACAGTT TCCGATGGTA CGAACACGAC TATCCATATC CATTAGCACG CTGGAATCAT
CACCCCGAGT TCGAGATCCA CCTGATCCGC CAAGGCAATG GTAAGCTGCT TGCCGGGGAC
TATATCGGCC ACTTCGGCCC TGGTCATGTG GCGCTAATGG GCCCCGGGCT ACCCCATGAC
TGGATCAGCG ATCTGGCGCC AGAACAAGTT ATTCAGGGAC GCGATGTAGT TCTGCAGTTC
GACGGGGAAG CCCTGCTGTG TTTGCGTGAA ACACTGCCCG AACTGGGCGC GTTGCAATCC
CTGTTCAGTC GGGCTCGGCA AGGCATCGAA TTTCGTGGCG AAACGGCCCG TACTGCCGCC
CGTCTGCTAG AGGCTATTGG ACAGACAGAC GGCCTGAAAC GCCTAGCGTT GTTTCTGTCG
CTTCTGGAAA CCCTGGTCCA GGCCGGAGCT GATGAGAGTC GCATACTGGC CAGCCCGCAT
TATGCGCCAA TGTTGGATAG CCTGACGACC GAGCGGATGA ATCGGATCTT CGATTACATC
CTAGGAAATC TAGCTGGAGA AATCCGTATG TCAGTCATCG CGCAACATCT GCAGATGAGC
GAACCAGCCT TCTCACGCTT TTTCAAGCGG ACGACCGGAC ATACCTTCGT TGGCCTGATC
CGCAAGTTGC GGATCCAGCG GGCATGTCGC TTGCTGCTGC AAAGCCAGCA GCCGATCGCA
GAGATTTGCT TAGAGGTGGG TTATGGCAAC CTGTCGAACT TCAATCGTCA CTTCCGCCAT
GAAATGCATA CAACGCCCAG TGACTACCGT AAACAACTCG CAATGCGCTC TATTATTAGA
AAATAA
 
Protein sequence
MKGRQFGERT SDFEVILNEP QHSFRWYEHD YPYPLARWNH HPEFEIHLIR QGNGKLLAGD 
YIGHFGPGHV ALMGPGLPHD WISDLAPEQV IQGRDVVLQF DGEALLCLRE TLPELGALQS
LFSRARQGIE FRGETARTAA RLLEAIGQTD GLKRLALFLS LLETLVQAGA DESRILASPH
YAPMLDSLTT ERMNRIFDYI LGNLAGEIRM SVIAQHLQMS EPAFSRFFKR TTGHTFVGLI
RKLRIQRACR LLLQSQQPIA EICLEVGYGN LSNFNRHFRH EMHTTPSDYR KQLAMRSIIR
K