Gene Avin_16370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_16370 
Symbol 
ID7760572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1618795 
End bp1619811 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID643804537 
ProductTranscriptional regulator, AraC family 
Protein accessionYP_002798827 
Protein GI226943754 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCG AGCGCTACTC CATCTCCATG CATTTCCCCC GGGTGCTGAT GAACGCCGCG 
CGCCGTCGCG GGCTCGACGA GGACAGGCTG CTCGCCGAAG CCGGCATCAG CCGCCGGCTG
CTCGACAACC CGCACCTGCG CATCACCCCC GACCAGTTCA GCCGGCTGAT GCGCGGCGTC
TGGCGCCTGG GCGACGACGA GTTCCTCGGC ATGGGCGCGC AACGCTGCCG CCAGGGCATC
TTCGCGCTGA TGGCCAAGCA GGTGGTCCGC TCGCGCACCC TGGGCTCGGT CTATTACAAA
CTCGGCCACT TCTACAATCT GGTGAACGAC TCGCTGCGCA TGGAACTGCA GGTCGAAGGC
GACGAGGCCC GCTTCTCGAT GGCCCTGACC GATCCGTCCC AGGACCCGGA CTACCTGCTG
CGGGAATTCC TGCTGCTGCT CTGGCACCGC TTTCCCAGTT GGCTGATCGG CCAGCGGATT
CCGCTGAAGT ACGCCACCTT CGACCACGCG GCCCCCGAGC ATCTGGCCGA GTACCGCCTG
ATGTTCCCCT GCCCGGCGCG CTTCGAGCAG CCGACCAACA GCCTGGTGTT CGAGGCACGC
ATGCTCGACG CCCCGGTGGT GCAGACCCCC GAGGCCCTGG CCACCCACCT GCGGCGGGCG
CCGATCGACT GGTTCACCCG GCCCGCCTAC TACCCCGTGT ATACCCGGCG GGTACGCGAT
CATCTGGAAA GATCCGGCGA CCTGGCCGGC GCGACCATCC AGAGCACCGC CGCCGCCCTG
CACCTGACCG AACGCACCCT GCGCCGCCGG CTCAGCGCCG AAGGCAGCAG CTTCCAGGGC
ATCAAGGACG GCATGCGCCG CGACATGGCC ATCCACTACC TGACCCAGCC TTCCATGCCG
ATCAGCCAGG TCGCCCGGCA GTTGGGCTTT TCCGAGCCGT CCGCGTTCAC CCGGGCGTTC
AAGCAGTGGA CTGGCGAGCT ACCCAAGACC TACCGGGACG CGGCCCGAAA AATGTAA
 
Protein sequence
MSIERYSISM HFPRVLMNAA RRRGLDEDRL LAEAGISRRL LDNPHLRITP DQFSRLMRGV 
WRLGDDEFLG MGAQRCRQGI FALMAKQVVR SRTLGSVYYK LGHFYNLVND SLRMELQVEG
DEARFSMALT DPSQDPDYLL REFLLLLWHR FPSWLIGQRI PLKYATFDHA APEHLAEYRL
MFPCPARFEQ PTNSLVFEAR MLDAPVVQTP EALATHLRRA PIDWFTRPAY YPVYTRRVRD
HLERSGDLAG ATIQSTAAAL HLTERTLRRR LSAEGSSFQG IKDGMRRDMA IHYLTQPSMP
ISQVARQLGF SEPSAFTRAF KQWTGELPKT YRDAARKM