Gene Avin_16310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_16310 
Symbol 
ID7760566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1613701 
End bp1614909 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID643804531 
Productmajor facilitator superfamily transporter 
Protein accessionYP_002798821 
Protein GI226943748 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCGA CGATGTGGCG CACCAGTGGC TGGGTCCTGC TGGGTGCCTC GCTGATCCTG 
GCCCTGTCGC TGGGCGTGCG CCATGGCTTC GGCCTATTCC TGGCGCCGAT GAGCGGCGAG
TTCGGCTGGG GGCGGGAGGT GTTCGCCTTC GCCATCGCCC TGCAGAACCT GATCTGGGGA
CTGACGCAGC CCTTCACCGG GGCGCTGGCC GACCGCTACG GCGCGGCGCG GGCGGTGGTC
GTCGGCGGGC TGCTCTATGC GCTGGGGCTG GTGCTGATGG CGCTGGCCGA TTCGCTCTGG
ACGCTATCGC TGAGCGCGGG ACTGCTGATC GGCGTCGGCC TGTCCGGCAC CTCCTTCTCG
GTGATCCTCG GCGTGGTCGG GCGTGCCGCG CCGGCGGAGA AACGCAGCAT GGCGATGGGC
ATCGCCGCGG CCGCCGGTTC CTTCGGCCAG TTCGCCATGC TGCCCGGCAC CCTCGGCCTG
ATCGGCTGGC TCGGCTGGTC GTCGGCGCTG CTGGCGCTGG GGCTGCTGGT CGCCCTGATC
GTGCCGCTGG TGGGATTGCT GAAGGATCGC CCGCAGCCGC CGCAGGCTCA CGAGCAAAGC
CTGGGCGAGG CATTGCGCGA GGCGGCCGGT CACGGCGGAT TCTGGCTGCT GGCGCTGGGT
TTCTTCGTCT GTGGCTTCCA GGTGGTGTTC ATCGGTGTGC ACCTGCCGGC CTATCTGGTG
GACCGGCACC TGCCGGCCCA GGTCGGCACC ACGGTGCTGG CGCTGGTGGG GCTGTTCAAC
GTGTTCGGCA CCTATCTCGC CGGTTGGCTC GGCGGGCGCC ATGCCAAGCC GCCGCTGCTG
AGCGTGCTCT ATCTGCTGCG CGCCGTGGTG ATCGTCGCCT TCGTCTACCT GCCGCTCAGC
GAGTGGAGCG CCTATGCCTT CGGCATGGCC ATGGGCCTGT TGTGGCTGTC CACGGTGCCC
TTGACCAACG GCACCGTGGC GACCCTGTTC GGCGTGCGCA ACCTGTCGAT GCTCGGCGGC
ATCGTGTTCC TCTTCCATCA GCTCGGCGCC TTTCTCGGCG GCTGGCTGGG CGGCTGGCTC
TACGACCGTA CGGGCAGCTA CGAGCTGGTC TGGCAGATCT CCATCGCCCT CAGCCTGGTG
GCCGCGCTGC TCAACTGGCC GGTGCGCGAA CAGCCGGTGG CGCGCCTGCG CGCGGCCGAG
GCGGGATGA
 
Protein sequence
MTSTMWRTSG WVLLGASLIL ALSLGVRHGF GLFLAPMSGE FGWGREVFAF AIALQNLIWG 
LTQPFTGALA DRYGAARAVV VGGLLYALGL VLMALADSLW TLSLSAGLLI GVGLSGTSFS
VILGVVGRAA PAEKRSMAMG IAAAAGSFGQ FAMLPGTLGL IGWLGWSSAL LALGLLVALI
VPLVGLLKDR PQPPQAHEQS LGEALREAAG HGGFWLLALG FFVCGFQVVF IGVHLPAYLV
DRHLPAQVGT TVLALVGLFN VFGTYLAGWL GGRHAKPPLL SVLYLLRAVV IVAFVYLPLS
EWSAYAFGMA MGLLWLSTVP LTNGTVATLF GVRNLSMLGG IVFLFHQLGA FLGGWLGGWL
YDRTGSYELV WQISIALSLV AALLNWPVRE QPVARLRAAE AG