| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16260 |
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| Symbol | eexF |
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| ID | 7760561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1606901 |
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| End bp | 1608319 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643804526 |
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| Product | Type I secretion outer membrane protein |
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| Protein accession | YP_002798816 |
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| Protein GI | 226943743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTGC AACGCACGCC CTACATCATG TTTCTGGCCC TGGTGAGCGT CTCGGTACAG
GCCGCGCCCC CACGGAGCGA TTCGACGCCG GCCGTGCCGT CCGGCGCGGA AAAACGGGAA
GTCCGCGCCT CGGAATACAC CGCCGATCTG CTGCAGTTGT ACGGGGAGTC GCGGCTGGAG
GACCCGCGGG TCCTGGCCGC CTATGCGCGC GCCCAGGCCG GCAAGGAGCG GCAACGCGAG
GCGCTGGGAG AGTTGCTGCC GCAGGTCTCG GCGACCACCG TGTTCAGCCG CAACACGCGC
GACGACGATG CGGCGCGTAG TTCCTACGAC ACGGAGCGTT ATTCCCTCAC CTTGACCCAG
CATCTCTACA ACAAGCCCGC CTGGGAGAAT TACCAGCGCT TCAAGAGTCT GGCCAAACGC
GACCAGTCCG AGGCCGAGGA TGCCCAGGCG GAAGCGGCCA TCGACCTGGC GCAGCGCTAT
TTCGTCGCCC TGGCTTCCGA CGACGAGCTC GAGCTGGTCC TGGCCGAGCG CCGCGCCACC
CAGAAGAACC TGGACCGCGT CAATGCGCTC TACGAAAAGC AACTGGCGAT GATCACCGAC
GTCCTCGATC TCCGGGCGCG CATCGATGCG CTGGCCGCCG ACGAGGTCGA CGCGCGCAAC
CAGGTTCGTC TCAGCCGCGA GGAGCTTTCC GAAGTCATCG GGCGCCCTGT GCAGGAGCGG
CTCAGCCGTA TCCGCGACGA CATCGAACTG CAGGCTCCCC AGGAGACCCT GGAAGTCTGG
ATCGATCGCG CCATCGCCGC CAACCCGGGG CTCAAGGCGC GGCAGGACGC GCTCGCGGCG
GCCGATGCGG CCATCCGCGA AGGCAAGGGC GGGCACTATC CCTCCCTCAG TCTCAACCTG
TCGGCGCTGC GCAGCGACGC CGGCTACGAC AACAACCAGA CGAACCGCTA CGACAACTAT
TCGGCCGGTA TCGCCCTGCA GGTACCCATC TACAGCGGCG GTTCCACCTC CGCCCGGGTC
CGTGCGCTGC ACAACGACCG GGATTCGGCC GAGCAGGAGC TCGAGGCGAT GCGGCGTCAG
GTGTTCAAGG AAACCACCAG CTCCTATCTC ACGGCCCAGG CCAGCGTGGA GCGGATCCGC
GCCTCGCGCA ATGCGCTCGA GTCGGCGAAG AAGTCCACGG AGGCCGCCGA AAAGGGCTTC
CAGTTCGGCG TGGTGAACGC GGCCGACGTG TTGACCAACG TGCAGAACGA GTACCGGGCA
CGGCGCGATC TCCTGCAAGC CCAGTACGAC TTCATCACCA ATCTTCTGAT TCTGAATCGC
TGGGCCGGCA GGCTGTCCAA GCAGACCATC GAGAACGTCA ACATATGGCT CGCCCAGGGC
GCTCCGGGGC GTGTCGCCAG GCGCAACGCA TCGCGCTGA
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| Protein sequence | MTVQRTPYIM FLALVSVSVQ AAPPRSDSTP AVPSGAEKRE VRASEYTADL LQLYGESRLE
DPRVLAAYAR AQAGKERQRE ALGELLPQVS ATTVFSRNTR DDDAARSSYD TERYSLTLTQ
HLYNKPAWEN YQRFKSLAKR DQSEAEDAQA EAAIDLAQRY FVALASDDEL ELVLAERRAT
QKNLDRVNAL YEKQLAMITD VLDLRARIDA LAADEVDARN QVRLSREELS EVIGRPVQER
LSRIRDDIEL QAPQETLEVW IDRAIAANPG LKARQDALAA ADAAIREGKG GHYPSLSLNL
SALRSDAGYD NNQTNRYDNY SAGIALQVPI YSGGSTSARV RALHNDRDSA EQELEAMRRQ
VFKETTSSYL TAQASVERIR ASRNALESAK KSTEAAEKGF QFGVVNAADV LTNVQNEYRA
RRDLLQAQYD FITNLLILNR WAGRLSKQTI ENVNIWLAQG APGRVARRNA SR
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