Gene Avin_16110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_16110 
Symbol 
ID7760546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1590724 
End bp1591758 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content65% 
IMG OID643804511 
Producthypothetical protein 
Protein accessionYP_002798801 
Protein GI226943728 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.939535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA AAGGCTTCGC TCTCATCGCC GTGCTCGGCC TGCTGACGGT GCTCTCCCTG 
GTCGCCGCCT TCATCGCCGG TTACGCCGAG CAGCGCATGG AACAGACCTA CCGGTTGCGC
GAACGCCTGC AGGGCAAACT CGACAGCGAA GCCACCCTGG CCACCCTGCT GCATATCATC
GCAACCCGTC CGCGGGTACA GAACGCCTAT CTGCTGCAGG CACCCGCCAG CCGGGCCGAC
AACGACGACC CCTTTTCCCG CGGCCAGGAT ATCCCGGACA TCGGCGCACT ACCGCACCTC
AAGGTCGATG GCCAGGTCTA TCAAGGCCTC GGCAGCAGCC GCTTCGTCTT GCAGGACGAA
GGCTCGCTGC TCAGCCTGCT CGACCCCGAC CGCGAGCGCT GGAGCGCACT TTTCCAGCAG
CACGGCCTGA GCCTGCAGCA GGCCGAACGT TTCCTCGACC AGTTGCAGGA CTACACCGAC
CGGGACGACC TGCGCCGCCT CAACGGTGCC GTCTCCAACG ACTACGCCAG CCAGGGCCTT
CCCCCACCGC CGCAGCGCCT GATGATCAGC CCCGGGCAAG TCTTCAACCT GCTCGACGGC
GCCGCCCTGC AAGATGACCT CCTCCGGCTG CTGCCGCTGA TCACCCCCCG TAGCGGCCAG
TTGCACAACA TCAACACGGC GCCCCGGGAA GTCCTGCGAA CCATCTCCGG CATCGATGAC
GCACTCGCCC AGGCGCTCGC CGACGAACGG CGCAAGCGTC CCTTCGTCGA CCTCGCCGAA
GCCAACCAGC GTCTCGGCCG CATTATTCCG CTCGATCCGC TGGGAACGCC CAGCCAGGCC
TCGTCATTCC TGCGTATCCA GCTCTGGGCC GATGAAGGCA GACAGCCATT ATGGCTTGGG
CTATCATCCA CGCCCGCCTC CAGACTCGCC CCGTGGGAAA TTGATTACAC CTTCGTTTTC
AGTCTGCGGC AGCCTTCCAC AGCGCCTCTA TCACTGGCTT TTCCGCCGCT GTTCGAGCCA
GCAATGGACG ATTGA
 
Protein sequence
MKQKGFALIA VLGLLTVLSL VAAFIAGYAE QRMEQTYRLR ERLQGKLDSE ATLATLLHII 
ATRPRVQNAY LLQAPASRAD NDDPFSRGQD IPDIGALPHL KVDGQVYQGL GSSRFVLQDE
GSLLSLLDPD RERWSALFQQ HGLSLQQAER FLDQLQDYTD RDDLRRLNGA VSNDYASQGL
PPPPQRLMIS PGQVFNLLDG AALQDDLLRL LPLITPRSGQ LHNINTAPRE VLRTISGIDD
ALAQALADER RKRPFVDLAE ANQRLGRIIP LDPLGTPSQA SSFLRIQLWA DEGRQPLWLG
LSSTPASRLA PWEIDYTFVF SLRQPSTAPL SLAFPPLFEP AMDD