Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_16110 |
Symbol | |
ID | 7760546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1590724 |
End bp | 1591758 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643804511 |
Product | hypothetical protein |
Protein accession | YP_002798801 |
Protein GI | 226943728 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.939535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAA AAGGCTTCGC TCTCATCGCC GTGCTCGGCC TGCTGACGGT GCTCTCCCTG GTCGCCGCCT TCATCGCCGG TTACGCCGAG CAGCGCATGG AACAGACCTA CCGGTTGCGC GAACGCCTGC AGGGCAAACT CGACAGCGAA GCCACCCTGG CCACCCTGCT GCATATCATC GCAACCCGTC CGCGGGTACA GAACGCCTAT CTGCTGCAGG CACCCGCCAG CCGGGCCGAC AACGACGACC CCTTTTCCCG CGGCCAGGAT ATCCCGGACA TCGGCGCACT ACCGCACCTC AAGGTCGATG GCCAGGTCTA TCAAGGCCTC GGCAGCAGCC GCTTCGTCTT GCAGGACGAA GGCTCGCTGC TCAGCCTGCT CGACCCCGAC CGCGAGCGCT GGAGCGCACT TTTCCAGCAG CACGGCCTGA GCCTGCAGCA GGCCGAACGT TTCCTCGACC AGTTGCAGGA CTACACCGAC CGGGACGACC TGCGCCGCCT CAACGGTGCC GTCTCCAACG ACTACGCCAG CCAGGGCCTT CCCCCACCGC CGCAGCGCCT GATGATCAGC CCCGGGCAAG TCTTCAACCT GCTCGACGGC GCCGCCCTGC AAGATGACCT CCTCCGGCTG CTGCCGCTGA TCACCCCCCG TAGCGGCCAG TTGCACAACA TCAACACGGC GCCCCGGGAA GTCCTGCGAA CCATCTCCGG CATCGATGAC GCACTCGCCC AGGCGCTCGC CGACGAACGG CGCAAGCGTC CCTTCGTCGA CCTCGCCGAA GCCAACCAGC GTCTCGGCCG CATTATTCCG CTCGATCCGC TGGGAACGCC CAGCCAGGCC TCGTCATTCC TGCGTATCCA GCTCTGGGCC GATGAAGGCA GACAGCCATT ATGGCTTGGG CTATCATCCA CGCCCGCCTC CAGACTCGCC CCGTGGGAAA TTGATTACAC CTTCGTTTTC AGTCTGCGGC AGCCTTCCAC AGCGCCTCTA TCACTGGCTT TTCCGCCGCT GTTCGAGCCA GCAATGGACG ATTGA
|
Protein sequence | MKQKGFALIA VLGLLTVLSL VAAFIAGYAE QRMEQTYRLR ERLQGKLDSE ATLATLLHII ATRPRVQNAY LLQAPASRAD NDDPFSRGQD IPDIGALPHL KVDGQVYQGL GSSRFVLQDE GSLLSLLDPD RERWSALFQQ HGLSLQQAER FLDQLQDYTD RDDLRRLNGA VSNDYASQGL PPPPQRLMIS PGQVFNLLDG AALQDDLLRL LPLITPRSGQ LHNINTAPRE VLRTISGIDD ALAQALADER RKRPFVDLAE ANQRLGRIIP LDPLGTPSQA SSFLRIQLWA DEGRQPLWLG LSSTPASRLA PWEIDYTFVF SLRQPSTAPL SLAFPPLFEP AMDD
|
| |