Gene Avin_15990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15990 
Symbol 
ID7760534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1576965 
End bp1578803 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content49% 
IMG OID643804499 
Producthydrolase (HAD superfamily) protein 
Protein accessionYP_002798789 
Protein GI226943716 
COG category[R] General function prediction only 
COG ID[COG5610] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA TTGCCAATGA TTATTGCGAT ATGCCCAGCT TGGCTGCTCT ACGCTTCTCG 
CTTGACGTTG CCGATGATCT TCAGCAACTG ATTACAAGTG CTACAGCGAT CTCCTTCGAT
TTTTTTGACA CTCTTTTCGT TCGCCCTCTT GCCCATCCCG AGGATGCTTT CGATGTCCTT
GGCTGTCAAT TCGATATCCC GGATTTCCGG GCTATGCGGC GTGCAGCGCA GGCCGAGGCC
TTTCGCCGGA TGCTGGCTTC CGGGCGAAAA GAAATCACGC TTGAGAATAT CTATGCCTGT
TTTGCAGAAA CAAGCACTCC CGCCGATGTA TTGATGCGTG CTGAGTATGA GTTGGAGCGG
GCATTGATAG AGCCAAACCC GGAATTGTTT CCGCTGTTCC GTATGCTACT CGACAGTGGC
AAGCCTGTGG TCATTACCTC GGATATGTAT CTGTCTGTCG ACTTCTTTCG TGACGTACTT
AGGCCACATG GGCTGGAGCA CGTGCCGCTG TTCATATCTG CGGATTGCAA TGCGACCAAG
CGCGATGCCG GTGAGCTCTT TGACATTCTA GCAAGTAGAT TGGGCGTACG CACAAAGGAA
ATTTTGCATA TCGGTGATAA TGAAATGGCC GATGTGCAGC GGCCGCGTGA GAAAGGACTG
ATGGCTTTCC ATTATCAGTC AAAACACTTA CGCAGCATCA AGAAAGGGAG GTCACTCGCA
GCCTCCATCG GTCATGGCCT GTTACAGACA CGAGCTCGTG ATATCGAGCC GAACTCCTAT
GTGGAACTCG GTTTTCTTTA TGGTGGAGCT GCAATTCTTG GGTTTCTCGA GTGGATCAAG
GAGCGTACCC ATCAGGATGG TATCGATCAT GTACTTTTCT TGTCTCGCGA TGGCTATTCG
CTTGAGCGTA TAGCCCGGGC TCAGGAGGAT TGCGGATTAC CCGATTTTTG TTATTTCCTG
GGCTCGCGCA CAGCTTATAC GCTGGCCTCC ATTACAGCCG ATAATTTCAG TCAGTTTTTC
CCATTTTTGC TCTCGGGAGG AGACGGCTTA GCACCATATG AGCTTCTTGA GCGCATTGGC
GTACAGCCGC CATCGCAGCA GATCATGGCA GAGTTAGGGT TGGGAACTGA TGTGCGCGTA
TGCCCGGCTC TTTATGAGAA AGTTTGTGGC TTCCTATACG GTTATCGTTG GGAAATTCTG
AAAGTTTGCC AGCGTAACCG TCGAGCATTA TATCAATATC TCAAACAAGT CGGTCTACAG
CCAGGAAGTC GGGTAGCTTT GGTGGATGTA GGATGGAGTG GCACAACCCA GGAAGCATTT
GAGCAAGCGA TTCGTCCTCT GATGAGTCTG GAGGTATTCG GATATTATTT TTGCTTGGCG
GATACACCCG AACGCCTCCG GCGCGAGCAG ACTCAACGCA TGTCGGCTAT GGTTACGGCT
GCCAATACTT CCGCTGCAAC TGTTGCCGGA ATTTATGCTA ACCGCGTAGC AGTGGAGCTG
TTTTTCTCTG CGCCGCATCA CTCTGTAATT GGTTTGCAAG TCGGTACAAA AGCTATTGAG
CCAGTTCTGG ATAGTGGGCG TGGTGATACT GGCAATATGC AGCAGATCGC TAGAGAGGTA
AGCAAAGGTA TAGAACTTTA TGCCGAGCAA TATGCCGCAA TACAGCGTAG GTTGAACTTT
AAAGAATCTC CGATGCAGAT TATTCTTCCT TTGATTGAAT TGATTGCACA TGAAGATAAA
GCCACTCATG ATTTGTTGAA TAAGATCAAG AATTTTGATG CGTGGGGGAG TTCACGCAAT
CATAACCTGA GTCTGACTGA CTATTTATCT TCCGCTTGA
 
Protein sequence
MEDIANDYCD MPSLAALRFS LDVADDLQQL ITSATAISFD FFDTLFVRPL AHPEDAFDVL 
GCQFDIPDFR AMRRAAQAEA FRRMLASGRK EITLENIYAC FAETSTPADV LMRAEYELER
ALIEPNPELF PLFRMLLDSG KPVVITSDMY LSVDFFRDVL RPHGLEHVPL FISADCNATK
RDAGELFDIL ASRLGVRTKE ILHIGDNEMA DVQRPREKGL MAFHYQSKHL RSIKKGRSLA
ASIGHGLLQT RARDIEPNSY VELGFLYGGA AILGFLEWIK ERTHQDGIDH VLFLSRDGYS
LERIARAQED CGLPDFCYFL GSRTAYTLAS ITADNFSQFF PFLLSGGDGL APYELLERIG
VQPPSQQIMA ELGLGTDVRV CPALYEKVCG FLYGYRWEIL KVCQRNRRAL YQYLKQVGLQ
PGSRVALVDV GWSGTTQEAF EQAIRPLMSL EVFGYYFCLA DTPERLRREQ TQRMSAMVTA
ANTSAATVAG IYANRVAVEL FFSAPHHSVI GLQVGTKAIE PVLDSGRGDT GNMQQIAREV
SKGIELYAEQ YAAIQRRLNF KESPMQIILP LIELIAHEDK ATHDLLNKIK NFDAWGSSRN
HNLSLTDYLS SA