Gene Avin_15980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15980 
Symbol 
ID7760533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1573417 
End bp1576965 
Gene Length3549 bp 
Protein Length1182 aa 
Translation table11 
GC content51% 
IMG OID643804498 
ProductGlycosyl transferase, family 2 
Protein accessionYP_002798788 
Protein GI226943715 
COG category[S] Function unknown 
COG ID[COG3551] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.967945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGA AAAATATAGT TGTCGTACTG GGCATGCATC GAAGCGGTAC TTCTGTAATC 
ACGCGAGGTC TGCAGGCGCT GGGTGTTCAG CTTGGTACCC GCTTGATGCC GGCAGCACCC
GGAAACAATG AAAAGGGTTT CTGGGAGGAT ATGGATGTCA ATGCACTCAA CATCGAGTTG
CTCGCTGCCC TGGGCCAGGA CTGGCATACC CTGACACCTT TGCTGCCGGA GCATTTGAAC
CCTTCGGTTC TCGACTCCTT CAAACTGCAA GCCGTGCAAT TGTTGAGGGA AAAGTTATCC
GGTGTCGAAA GTTTTGGTCT GAAGGACCCC CGGATCGCCA GGCTGCTGCC ATTCTGGACG
AGCATATTTG CCCATCTGGA TGTTCAGGTT CGCTATGTGG TCGCCTGCCG CCATCCTATG
AGTGTGGCTC GCTCGCTGGC CAAGCGTGAT GGTTTCGCCT TGGAAAAAGC CTATCAGTTA
TGGCTGGAAC ACATGCTGGC AAGCTTGGCG GGAACGCAAA ATCGTCCTCG GGTCGTTGTC
GACTATGACC TTCTCATGGA AGAGCCTGCC GTTCAGTTGC AGCGGATCGC GCAAGCACTG
GATCTTGAGT TCGACGCGGA CAGTCAGGCT TTTGCCGAGT ACAAGGAAGA ATTCTTGGAG
GAAGGACTCC GGCATAGCCG TTTCGCAGCG GCCGATCTGT GTCTGGACAA AGCAGCTTCT
CCGCAGGTGG AGGAGTTGTA CGACGCTCTG CTGCAGATGG CCAGTGATCG GATAGCCCCC
GATATACAAG AGGTAGAAGG GCTTATTGCG GCGTTGTCCG AGGAGTTACA GCGGAGTTAT
TCGCTGCTGC ATTACACCGA TCTATGCGAG ATACGGATTG GCGAATTCAC CAGTCAAGTG
GCTATTCAAG AAAGACAAAT AGCCGATGGT AACGCGCAGG TTGATACCTT GAATCAGACC
ATTGCCGAGC GCGAAGGTCA GATTCACACG CTGAATCAGT TAGTGGCAGA AAGGGATGGG
CAAATTGGCG GTCTGAACGG GATTGTCGCC GAGCGCGATG GCCAGATTCA TACATTGAAT
CAGGTAATCT TGGAAAGGGA AGGGCAGATT GGTGACCTGA ACGAGGTTAT CGCCGAGGGC
AACGGCCAGA TCCATGCGCT GAATCAGGTA ATCGCAGAAA AGGAAGAGCA GGTTGGTAGC
CTGAACGGGG TTTTAGCCGA GCGCGATGGT CAAATTCGTA TATTGAATCA GGTAATCGCA
GAAAGGGAAG AACAGATTGA CGGCTTGAAT AGGATTGTCG TCGAGCGTGA TGACCAGATT
CATGCGTTGG ATCAGGTAAT CGCCGAAAGG GAAGGGCAGA TTGGCGGCTT GAATAGGATT
GTCGCCGAGC ACAATGGCCA GATTCATGCG TTGAATCGGA TAGTCTCGGA AAGGGAAGGG
CAGATTGGCG GCCTGAACGA GGTAGTTGCC GGGCGTGATA GCCATATTCA AGAGCTGAGT
CGGATTGTGC ATGAGCGAGA TATCCAGATT GCCGCCATGC AGGAAATACA GTATGCCCTA
CACAACTCCA GAAGTTGGCG TATCACTGCT CCTTTGCGTC GTGCCAACCA TCTGAGACGC
AAGGTTGTGG ACGTTAAAGC TATCGCCTGT CGCCGGCTAC GAGATGAGTC TTTATCGACT
CTTCTGAAAA AGACGTTGGG AATCTTGCGT CGGGAAGGAC TGAATGGGCT AAGAGCGAGA
ATTCGCCATC AGCATTATCT GTCGACACTA GCCCCTGCGA CTCCTGCACC GCAGCTCTCA
CCAACTCCTC CCTCCGCGGG AAATATGACC TCCATACCTA TGGCCATTGT GCGCCATTCT
GGGGGACGCT ACGAATTGGC CGCTACCTCT AAAGGCTATA CCTATATCGA GCCACAGCGG
CCTGCCGACT TGGGAGCCCG ACTCGCAATT CTCGACATTA CGCCTTTGTT CTCGATCGTG
GTACCTGCCT ATAACACCAG CTCAGAACTA CTGGATGCCG TACTCTCTTC AGTACGGGCC
CAGTGGTATC CTCACTGGGA GCTTATTTTG GTTGACGACG CCAGCCCTTC CGAAGAAACT
CGGCGGGCAT TGGCCGAGAT AGACGATCCG AAAATCAGGG TTCTGCACCT GGAGAGCAAT
AAAGGTATTT CCGGTGCCAC CAATGTAGGC TTGGCTGCCG CTCAAGGCGA GTTCATCGTG
TTCATGGATC ACGATGACGA ACTAACCGTC GATTGCTTGT ATGAGTTGGC ATTATGCATC
AATCGCGACC AGCCGGATTT TATCTATAGT GATGAGGATA AACTTACCGA GGAAGGGGAA
TATACCCAGC CACATTTCAA GCCGGATTGG TCTCCCGATA CCATGATGAG CACCATGTTC
ACCTGCCATG TATCTTGCGT GCGTCGCAGT CTGTTGAGCA AAGTGGGTGA ACTGCGTTCG
GAGTTTGATG GCTGTCAGGA TTGGGATTTT ATCTTGCGTG TCGTCGAGCA TACGAATCGT
ATAAGTCATA TTCCGAAGGT TCTTTATCAT TGGCGAATAA TTCCGGCTTC CGTCGCATCC
GATATCTCCG CCAAGCCTTA TGTACTTGAA GCGTCCCGGC GTGTTCGACT GGATGCGTTG
GAGCGTCGAG GCCTCAAAGG GAGTATAGAG CCGGTAGCTC AAGTTCCAGG ATATTTTCGT
GTCAACTATC ACCTGCAAGG TTCGCCCCTG ATTTCGATTA TCATTCCTAG TCGGGATAAT
GGTTCGGTTC TTCGCCGTTG TCTGGATTCC ATCCAGGAAA AAAGTAGCTA TCGGAATTTT
GAAATCATCA TCCTTGATAA TGGTTCTGTT GAGGCTTCGA CTGTTGCTTA TCTGAAGGAG
TTGCAAGAAA AAGGGGTAGC GCAGATTATT CGTCATGATG CTCCATTCAA TTTCTCCGAG
CTTAATAATA TCGGTGCCAG GACTGCTGGT GGCGAATTGC TGTTGTTCCT CAACGATGAT
ACCGAAGTGC TTTGCAATGA CTGGCTGGAG CGCATGGGAG GGTATGCTCA GTTAGTACAT
ATTGGTGCTG TAGGGGCCAA ATTGCTTTAC CCGGATAGCT CTGAAATCCA ACATGCGGGT
GTCCTCAATT TGGCGAATGG CCCTGTTCAT GCGTTCCTGC GTCATCATAG TGAGCGCCCA
GGCTATTTTA TGCGTAATTT GTTGGAGTAC AACTGGCTGG CAGTCACTGG CGCCTGCTTG
ATGATGGAGG CTTATAAGTT CAATGAGTTG GGGGGCTTCG ATGAAACCCT GCCGGTTGCT
TATAACGATA TTGAGTTGTG TATAAGAGCT GTTGAGAAGG GCTATTATAA TGTGGTGTGT
CAATCAGTGA CTCTGATCCA TCATGAGTCG GTCAGTCGAG GCCTTGATCA TGTCGATCCT
GTAAAATTCG CACGTTTACA GAGAGAGCTT CGGCGTCTTT ATGATATGCA TCCCATGTTT
TTTCAATATG ATCCTTTCTA TAATCCGAAC TTGCATCCAA ATGGGATTAA TTTTGAGGTG
GCTTTATAA
 
Protein sequence
MEQKNIVVVL GMHRSGTSVI TRGLQALGVQ LGTRLMPAAP GNNEKGFWED MDVNALNIEL 
LAALGQDWHT LTPLLPEHLN PSVLDSFKLQ AVQLLREKLS GVESFGLKDP RIARLLPFWT
SIFAHLDVQV RYVVACRHPM SVARSLAKRD GFALEKAYQL WLEHMLASLA GTQNRPRVVV
DYDLLMEEPA VQLQRIAQAL DLEFDADSQA FAEYKEEFLE EGLRHSRFAA ADLCLDKAAS
PQVEELYDAL LQMASDRIAP DIQEVEGLIA ALSEELQRSY SLLHYTDLCE IRIGEFTSQV
AIQERQIADG NAQVDTLNQT IAEREGQIHT LNQLVAERDG QIGGLNGIVA ERDGQIHTLN
QVILEREGQI GDLNEVIAEG NGQIHALNQV IAEKEEQVGS LNGVLAERDG QIRILNQVIA
EREEQIDGLN RIVVERDDQI HALDQVIAER EGQIGGLNRI VAEHNGQIHA LNRIVSEREG
QIGGLNEVVA GRDSHIQELS RIVHERDIQI AAMQEIQYAL HNSRSWRITA PLRRANHLRR
KVVDVKAIAC RRLRDESLST LLKKTLGILR REGLNGLRAR IRHQHYLSTL APATPAPQLS
PTPPSAGNMT SIPMAIVRHS GGRYELAATS KGYTYIEPQR PADLGARLAI LDITPLFSIV
VPAYNTSSEL LDAVLSSVRA QWYPHWELIL VDDASPSEET RRALAEIDDP KIRVLHLESN
KGISGATNVG LAAAQGEFIV FMDHDDELTV DCLYELALCI NRDQPDFIYS DEDKLTEEGE
YTQPHFKPDW SPDTMMSTMF TCHVSCVRRS LLSKVGELRS EFDGCQDWDF ILRVVEHTNR
ISHIPKVLYH WRIIPASVAS DISAKPYVLE ASRRVRLDAL ERRGLKGSIE PVAQVPGYFR
VNYHLQGSPL ISIIIPSRDN GSVLRRCLDS IQEKSSYRNF EIIILDNGSV EASTVAYLKE
LQEKGVAQII RHDAPFNFSE LNNIGARTAG GELLLFLNDD TEVLCNDWLE RMGGYAQLVH
IGAVGAKLLY PDSSEIQHAG VLNLANGPVH AFLRHHSERP GYFMRNLLEY NWLAVTGACL
MMEAYKFNEL GGFDETLPVA YNDIELCIRA VEKGYYNVVC QSVTLIHHES VSRGLDHVDP
VKFARLQREL RRLYDMHPMF FQYDPFYNPN LHPNGINFEV AL