Gene Avin_15900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15900 
Symbol 
ID7760525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1565228 
End bp1566760 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content64% 
IMG OID643804490 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_002798780 
Protein GI226943707 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTTGGC CAGAGCAGCC TGCTCGGCAG GATGTCGGGC ATGGCGTGGC AAATGGAAGT 
GTCGAGCTGA AGGAGCGAGC AGTGTCATAC CCGGAAATTC TTCACCACGG CGCCACCCAG
GGCGTCACTG GTTCCTGCCA TCAGTTGCTG ATGGATGCGC AGCACAGCCT GCTGATCGAC
TGCGGCCTGT TCCAGGGGGC GGAAACCTCC GCCGAAGGTC GGGCCGGAGC CGGCAGCCTG
GCCATCGACT TTGCGCTGGA TACCGTCAAG GCACTGATAG CGACCCATGT GCACGTCGAT
CATGTCGGAC GGATTCCCTA TCTGCTGGCG GCTGGCTTCA AGGGGCCGAT CCTCTGCAGC
GAGCCTTCGG CCAGGCTGCT GCCCATCGTT CTGGAAGATG CCTTCAAGCT GGGCGTAAGT
AGCGACCAGC GACAGGTGGA GCGTTATCTC GAATTGATCG GGCAGCGGTC GATCGCCTTG
CCCTACAAGC ACTGGTTCAC CCTGGCGGAT ACATCGACGC TGCTCTGCAG GATTCGCCTG
CAGCGGGCTG GTCACATCCT CGGCTCGGCC TACGTGGAGA TCGACCTGAC TTACAAAGCC
ATTGGCCGCA AGCGCCGCAT CCTCTTCTCC GGCGACCTGG GAGCCCCCCA TGCGCCGTTG
CTGCCGGCGC CGCGGCCGCC TTACCGGGCC GATACCCTGG TCATCGAGAG CACCTACGGC
GACCGTTTGC ACGAAGATCG CCGCAGCCGT CGGCAACGTC TCGAAACGAT GATCGAACAG
GCGCTGGCCG ACCGGGGCAG TGTACTGATT CCGGCCTTCA GCATCGGGCG AACGCAGGAG
CTGTTGTACG AGCTGGAAGA GATCATTTAT CGCAAGACTC GATCCCGTCC GGCAGCAAGG
GAGGCGGATG TCCGGTCATC CAGCCACGCC GACTGGCCGC AGCTTCCCAT CATTCTCGAC
TCCCCCCTCG CCAGCCGTTT CACCCAGGCC TATCGCGAGC TGCAACCCTT CTGGGACCGG
GAGGCCACCA AGCGGGCCAG GTCGGGGCGA CAGCCGCTGG GCTTCGAGCA ATTGATCACG
GTGGAAAATC ACGCCGATCA CCTGCGCATG GTCGAGCATC TGGCTAGCAC CGCCCGCCCG
GCCATCGTCA TCGCCGGCAG CGGCATGTGC ACCAGCGGGC GCATCGTCAA CTACCTGAAA
GCCATGCTGG GAGATCGTCG GCACAATATA CTCTTCGTCG GCTACCAGGC CATGGGCACG
CCCGGGCATG CTATCCAGAA ATATGGGCCA CGGGGCGGTT ACGTGGACCT GGACGGCGAG
CGCCTCGAGA TCAGAGCCGG GGTCGCCACC CTGGGCGGCT ATTCGGCCCA TGCCGATCGG
CAGGGACTGG TGAGTTTCAT CACCCGGATG CGCGAGTGGC CGGACGAGAT ACGCCTCGTC
CATGGCGAGG CCGACGCCAA GCGTGCGCTC GGTGCCGAAC TGCGGCGGCG TTATGCGGAA
AAACAGAAGA GGGTGAGCAT TATTACCCCC TGA
 
Protein sequence
MLWPEQPARQ DVGHGVANGS VELKERAVSY PEILHHGATQ GVTGSCHQLL MDAQHSLLID 
CGLFQGAETS AEGRAGAGSL AIDFALDTVK ALIATHVHVD HVGRIPYLLA AGFKGPILCS
EPSARLLPIV LEDAFKLGVS SDQRQVERYL ELIGQRSIAL PYKHWFTLAD TSTLLCRIRL
QRAGHILGSA YVEIDLTYKA IGRKRRILFS GDLGAPHAPL LPAPRPPYRA DTLVIESTYG
DRLHEDRRSR RQRLETMIEQ ALADRGSVLI PAFSIGRTQE LLYELEEIIY RKTRSRPAAR
EADVRSSSHA DWPQLPIILD SPLASRFTQA YRELQPFWDR EATKRARSGR QPLGFEQLIT
VENHADHLRM VEHLASTARP AIVIAGSGMC TSGRIVNYLK AMLGDRRHNI LFVGYQAMGT
PGHAIQKYGP RGGYVDLDGE RLEIRAGVAT LGGYSAHADR QGLVSFITRM REWPDEIRLV
HGEADAKRAL GAELRRRYAE KQKRVSIITP