Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_15870 |
Symbol | rpsA |
ID | 7760522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1562219 |
End bp | 1563898 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643804487 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_002798777 |
Protein GI | 226943704 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA GCTTTGCAGA ACTTTTTGAA GAAAGCCTGA AATCCCTCGA CATGCAGCCC GGTGCCATCA TCACCGGCAT TGTGGTCGAC ATCGACGGTG ACTGGGTTAC CGTGCATGCC GGCCTGAAGT CCGAGGGCGT CATCCCGGTC GAACAGTTCT ACAACGAGCA AGGCGAACTG ACCATCAAGG TGGGTGACGA GGTTCACGTC GCGCTGGATG CAGTGGAAGA CGGCTTCGGT GAAACCAAGC TGTCCCGCGA GAAAGCCAAG CGTGCCGAGT CCTGGCTGGT TCTGGAAGCT GCCTTCGCTG CCGACGAAGT CGTCAAGGGC ATCATCAACG GCAAGGTCAA GGGTGGCTTC ACCGTCGACA TCAACGGTAT CCGTGCGTTC CTGCCGGGTT CCCTGGTCGA CGTCCGTCCG GTGCGCGACA CCACCCACCT GGAAGGTAAA GAGCTCGAGT TCAAGGTCAT CAAGCTCGAC CAGAAGCGCA ACAACGTGGT CGTGTCCCGC CGCAGCGTCC TGGAAGCCGA GAACAGCGCC GAGCGCGAGG CCCTGCTGGA GTCCCTGCAG GAAGGCCAGC AGGTCAAGGG TATCGTCAAG AACCTCACCG ACTACGGCGC GTTCGTCGAT CTGGGCGGCG TGGACGGCCT GCTGCACATC ACCGACATGG CCTGGAAGCG CATCAAGCAT CCGTCCGAGA TCGTCAACGT CGGCGACGAA ATCGACGTCA AGGTGCTCAA GTTCGATCGC GAGCGCAATC GCGTCTCCCT GGGCCTGAAG CAACTGGGCG AGGATCCATG GGTCGCCATC AAGGCCCGCT ATCCGGAAGG CACCCGCGTC ATGGCTCGTG TTACCAACCT CACCGACTAC GGCTGCTTCG CCGAGCTGGA AGAGGGCGTG GAAGGCCTGG TGCACGTTTC CGAGATGGAC TGGACCAACA AGAACATCCA CCCGTCCAAG GTCGTTCAGG TCGGCGACGA AGTGGAAGTC ATGGTGCTGG ACATCGACGA AGAGCGTCGC CGCATCTCCC TGGGCATCAA GCAGTGCAAG TCCAATCCTT GGGAAGACTT CTCCAGCCGT TACAACAAGG GCGACCGCAT CACCGGTACC ATCAAGTCGA TCACCGATTT CGGCATCTTC ATCGGCCTGG AAGGCGGCAT CGACGGTCTG GTCCACCTGT CCGACATCTC TTGGAACGAG CAGGGCGAGG AAGCCGTGCG CCGCTTCAAG AAGGGCGATG AACTGGAAAC CGTCATCCTC TCCGTCGATC CGGAGCGCGA GCGCATCTCG CTGGGCGTCA AGCAACTGGC GGACGATCCG TTCTCCAGCT ACGCCTCCCT CAACGAGAAG GGCAGCATCG TGCACGGCAC CGTGAAGGAA GTCGATGCCA AGGGCGCGAT CGTCGACCTG GGCAACGATA TCGAAGCTGT GCTGAAGGCG TCCGAAATCA GCCGCGATCG CGTCGAAGAT GCCCGCAACG TGCTGAAGGA AGGCGACGAG GTCGAAGCCA AGATCATCAG CATCGATCGC AAGAGCCGTG TCATCAGCCT GTCGATCAAG GCCAAGGACG TGGACGACGA GAAGGACGCC ATCAAGGAAC TGCGCAAGCA GGAAACCGAG GCGCCCGGCC CGACCACCAT CGGCGACCTG ATCCGTGCTC AGATGGGCAA CCAGAGCTGA
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Protein sequence | MSESFAELFE ESLKSLDMQP GAIITGIVVD IDGDWVTVHA GLKSEGVIPV EQFYNEQGEL TIKVGDEVHV ALDAVEDGFG ETKLSREKAK RAESWLVLEA AFAADEVVKG IINGKVKGGF TVDINGIRAF LPGSLVDVRP VRDTTHLEGK ELEFKVIKLD QKRNNVVVSR RSVLEAENSA EREALLESLQ EGQQVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRIKH PSEIVNVGDE IDVKVLKFDR ERNRVSLGLK QLGEDPWVAI KARYPEGTRV MARVTNLTDY GCFAELEEGV EGLVHVSEMD WTNKNIHPSK VVQVGDEVEV MVLDIDEERR RISLGIKQCK SNPWEDFSSR YNKGDRITGT IKSITDFGIF IGLEGGIDGL VHLSDISWNE QGEEAVRRFK KGDELETVIL SVDPERERIS LGVKQLADDP FSSYASLNEK GSIVHGTVKE VDAKGAIVDL GNDIEAVLKA SEISRDRVED ARNVLKEGDE VEAKIISIDR KSRVISLSIK AKDVDDEKDA IKELRKQETE APGPTTIGDL IRAQMGNQS
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