Gene Avin_15780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15780 
Symbol 
ID7760513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1548343 
End bp1549563 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content63% 
IMG OID643804478 
Producttransposase, IS891/IS1136/IS1341 
Protein accessionYP_002798768 
Protein GI226943695 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAC TTCAAGCCTT CAAATTCGAA TTGATGCCAA CCGGCGAACA GCAGCGCCAG 
ATGCGCCGCT TCGCTGGCTC GTGCCGGTTC GTGTTCAACA AGGCATTGGC GTGGCAAAAG
GAACGCTACG AACAGGGCGA ATCGAGGCTC GGCTATGCCG GTCTATGCAA GCGGCTCACG
GAATGGCGGC ATGATCCGGA GACGGCCTGG CTGGCGAATG CGCCGGTTCA TCCGCTGCAA
CAGGCACTCA AGGACCTGGA GCGGGCCTAC GCCAACTTCT TCGCCCAGCG GGCCGACTTT
CCGCGTTTCA AGAAGAAGGG CCAGCGCGAC AGCCTCCGCT ACCCCGACCC GAAGCAGATC
AAGCTCGATC GGGCCAACAG CCGAATCTTC CTGCCGAAAC TCGGCTGGCT GCGCTACCGC
AACAGCCGGG AAGCGCTCGG CATGGTGAAG AACGTCACCG TCAGCCAGTC GTGCGGCAAG
TGGTACGTGA GCATCCAGAC CGCGCGCGAG GTCGAGCAAC CCCTTCCCGA CGGAGCGGCT
GTCGGTATCG ACATGGGCAT AACCCGCTTC GCCACGCTCT CGGACGGCAC GTTCTACGCA
CCGCTCAACA GCTTCAAGCG GCATGAGAAA CGACTGCGCA AGGCGCAGCG GGCGATGAGC
CGCAAAACCC GATTCAGCAA CAACTGGAAG AAGGCGAAAG CCCGCGTCCA GCGTATCCAT
TCCCGGATCG GCCATGCCCG CCGCGACTAC CTGCACAAGA TCTCGACCAC GATCAGCCAA
AACCACGCGA TGGTGTGTAT CGAGGACTTG CCGGTGCGGA ACCTGTCCAG GTCGGCGGCA
GGCACAACCG AAGTACCGGG CAGAAACGTT CGGGCCAAGT CCGGCCTGAA CAAATCCATC
CTCGACCAGG GCTGGTTCGA GTTCCGCCGT CAACTGGACT ACAAGCTGGC GTGGAACGGC
GGCTGGCTCG TTGCCGTGCC GCCACGGAAC ACCAGCCGCA CCTGCCCGTG CTGCGGGCAT
GTGTCGGCGG ACAACCGGCA GAGCCAGGCC CGGTTCGAGT GCGTGGAGTG TGGTTTCGAG
GAAAACGCCG ATGTGGTCGG CGCGATCAAT GTGTCAAGGG CGGGACACGC CCGGTTCGCC
TGTGAAGTGA GCGGTGTGGT AAGGCCGCCA GCAGCAGGAA CCCACCGAAG CGACTCAGGA
ATGGCTCGAT GCCGCGCTTG A
 
Protein sequence
MLRLQAFKFE LMPTGEQQRQ MRRFAGSCRF VFNKALAWQK ERYEQGESRL GYAGLCKRLT 
EWRHDPETAW LANAPVHPLQ QALKDLERAY ANFFAQRADF PRFKKKGQRD SLRYPDPKQI
KLDRANSRIF LPKLGWLRYR NSREALGMVK NVTVSQSCGK WYVSIQTARE VEQPLPDGAA
VGIDMGITRF ATLSDGTFYA PLNSFKRHEK RLRKAQRAMS RKTRFSNNWK KAKARVQRIH
SRIGHARRDY LHKISTTISQ NHAMVCIEDL PVRNLSRSAA GTTEVPGRNV RAKSGLNKSI
LDQGWFEFRR QLDYKLAWNG GWLVAVPPRN TSRTCPCCGH VSADNRQSQA RFECVECGFE
ENADVVGAIN VSRAGHARFA CEVSGVVRPP AAGTHRSDSG MARCRA