Gene Avin_15650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15650 
Symbol 
ID7760500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1535719 
End bp1536348 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID643804465 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_002798755 
Protein GI226943682 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.319022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCAGT ACTTCCAGAT CCATCCGGAA AACCCGCAAC TGCGCCTGGT TCGCCAGGCG 
GTGGAAATCG TCCGCGGCGG CGGGGTGATC GTCTACCCCA CCGATGCCTC CTATGCGCTC
GGTTGCCAGC TCGGCAACAA GGCCGGCCTG GAGCGTATCC GCCGCCTTCG GCAACTGGAC
GACCGGCACA ACTTCACCCT GGTGTGCAGC GACCTTTCGC AACTGAGCCT GTTCGCCCGG
GTCGACACCG GCGCCTTCCG CCTGCTCAAG ACCTGGACCC CGGGTCCCTA CACCTTCATT
CTCCACGCCA GCCGCGAAGT GCCGCGAATC ATGCTGCATC CCAAGCGGCG CACCATCGGC
CTGCGCATTC CGGCCAACCC CATCGCCCAG GCCCTGCTGG CGGAACTCGG CGAGCCGCTG
ATGAGCGCCA GCCTGATCCT GCCCGGCGAG ACGCTGCCGC TGAGCGACCC GGAGGAGATG
CGCCGGCGCC TCGAACGCCA GGTCGATCTG ATCGTCGACG GTGGAGCCGG TACGCTGGAG
GCCTCCACCG TGGTCAGCCT GCTCGAGGGC GAGCCCGAGG TGCTGCGCGT CGGTTGCGGC
GATCCGGCGC CCTTCGCCGG CGAAGCCTGA
 
Protein sequence
MSQYFQIHPE NPQLRLVRQA VEIVRGGGVI VYPTDASYAL GCQLGNKAGL ERIRRLRQLD 
DRHNFTLVCS DLSQLSLFAR VDTGAFRLLK TWTPGPYTFI LHASREVPRI MLHPKRRTIG
LRIPANPIAQ ALLAELGEPL MSASLILPGE TLPLSDPEEM RRRLERQVDL IVDGGAGTLE
ASTVVSLLEG EPEVLRVGCG DPAPFAGEA