| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15520 |
|---|
| Symbol | |
|---|
| ID | 7760487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1525470 |
|---|
| End bp | 1526765 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643804452 |
|---|
| Product | heavy metal sensor histidine protein kinase, two-component |
|---|
| Protein accession | YP_002798742 |
|---|
| Protein GI | 226943669 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCGC TGTCCCTCGG TACGCGCCTG AGCCTGCTGT TCGCCGTCTG CAGCGCGGCC
GTCTCGCTGC TCGCCGGGCT CTTCTTCAAC CAGGCCAGCG AGGCGCACTT CGTCGAACTC
GACCGGCAAC GACTGGCGGG CGAACTGGCG GTGCTGCGCG GCCTGCTTGA CGGCGTCGCC
GACCAGGCGG ACCTGCCGGG CCGCCTGCCC GCCGTGCGGG AAGAGCTGGC CCGGCATCCG
GAGCTGAGCC TGCATATCAT CGGCGGCGAC GGTCGCCTCT GGTTCGACAG CCTCCCCGAT
AGCGATCCCG CCGCCCAGCG CACCCTGGAG GCACGGAACG CCGATGGCAC GCGGCTGGTC
GTGCGCCTGA ACATCGCTCA CCACCGGCAT TTTCTCGAAG ACATGCAGCG CATGATCTGG
CTCGGCGTCG GTCTGTCCGC CCTGGCCACC GCCCTGCTCG GCGCCTGGGC GGTGCGCCGC
AGCCTGCGCC CGTTGCGGCG GATGGGCGAG GTGGCGGGCG GGATTTCCGC CAGCTCGCTG
ACCACCCGCC TGGAACAGGA CCGCCAGCCC GCCGAGCTGG CCGAACTGGC GCAGGCCTTC
AACGCCATGC TGGCGCGGCT GGAGGATGCC TTCGCCAGGC TCTCGGCCTT CTCCGCGGAC
ATCGCCCACG AGTTGCGCAC GCCACTGTCC AACCTGCTGA CCCAGACCCA GGTGACCCTC
TCCCGGCCAC GCGCCCTGGA GGAGTACCGC GAGGCCCTGC ATTCCAACCT GGAGGAACTG
CAGCGGCTGG CGCAGATGGT CGCCGACATG TTGCTGCTGG CCAAGGCGGA CCACGGCCTG
CTGTTGCCGA ACCGCGAGCC GCTGGCGCTC GGCGCGGAGA TCGACACGCT GCTCGACTAC
TTCGCACCGC TGGCCGAGGA TGCCGGGATA CGCCTGGAAC GCCGTGGCGA TGCCCGGCTG
ATGGCCGACC GCGGCATGCT GCTCCGGGCG CTGTCCAACC TGCTGGACAA CGCTCTGCGC
TTCACTCCGG CCGGCGGCGA GATCCGCCTG GAGCTGAGCG GCACCCCGGG CCGCCTGCGC
CTCGAGGTCG GCAACAGCGG CCCGGCCATA CCGCCCGAGC AGTTGCCGAA ACTGTTCGAC
CGCTTCTACC GGGTCGATCC GGCACGGCGC GAAGGCGACG GCGAGCACGC CGGCCTGGGC
CTCGCCCTGG CCCGCTCCAT CGTCCGCGCC CATGGCGGGG AGATCCGCTG CGAGTCCAGC
GAGGGCTGGA CGCGCTTCAT CCTCGAATTC GCCTGA
|
|---|
| Protein sequence | MRPLSLGTRL SLLFAVCSAA VSLLAGLFFN QASEAHFVEL DRQRLAGELA VLRGLLDGVA
DQADLPGRLP AVREELARHP ELSLHIIGGD GRLWFDSLPD SDPAAQRTLE ARNADGTRLV
VRLNIAHHRH FLEDMQRMIW LGVGLSALAT ALLGAWAVRR SLRPLRRMGE VAGGISASSL
TTRLEQDRQP AELAELAQAF NAMLARLEDA FARLSAFSAD IAHELRTPLS NLLTQTQVTL
SRPRALEEYR EALHSNLEEL QRLAQMVADM LLLAKADHGL LLPNREPLAL GAEIDTLLDY
FAPLAEDAGI RLERRGDARL MADRGMLLRA LSNLLDNALR FTPAGGEIRL ELSGTPGRLR
LEVGNSGPAI PPEQLPKLFD RFYRVDPARR EGDGEHAGLG LALARSIVRA HGGEIRCESS
EGWTRFILEF A
|
|---|
| |